Dyadobacter sandarakinus: HWI92_18235
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Entry
HWI92_18235 CDS
T07768
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dsn
Dyadobacter sandarakinus
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsn03009
]
HWI92_18235
Enzymes [BR:
dsn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HWI92_18235
Ribosome biogenesis [BR:
dsn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HWI92_18235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
QRR02714
LinkDB
All DBs
Position
4482149..4483615
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AA seq
488 aa
AA seq
DB search
MKKRTTSPKAGNNAQSASGASRSFQKSSGGTGGDRPFKRAKSEVESRFSKPSIKKSSLRF
SKTENTGQKARPDFSHEKPESFKPRSFRDREEFTSEGKKPFSKPERPFSKTDKPFSKADR
PFSKTDKPFSKSDKPFSKSDKPFSKSDKPFPRTEAPFSKSEKPSFRESGRSKGFGKPERE
SERPFGFKQKENSGFKKKDDSEPRDHAAPQSGSAEPEADQSGLERRVGRYKSAPGYDLSG
YEKRTGKKVKEDPSDIRLNRYIANAGICSRREADDLIASGQISVNGKTVTEMGYKVKLSD
VVKYGKRALNPEKMVYILINKPKDYITTTDDPEERRTVLDLIKGACDERVYPVGRLDRNT
TGLLLLTNDGELAGKLTHPSTGIGKIYQAELDRPIATEDFEKLQQGVALEDGFIRPDEVG
IVTPDAMVVGLEIHSGRNRVVRRIFEHLGYEVKKLDRTVFAGLNKKDLPRGKWRFLTERE
VIKLKYML
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaacaaccagccccaaagcgggcaacaatgcacaatcggcatccggcgcg
tcccggtcattccagaaatccagcggtggtacaggaggcgatcgccctttcaagcgggcc
aagtccgaggtagaaagccggttcagcaaaccatccatcaaaaaatcaagtctgcgtttt
tccaaaactgaaaataccgggcaaaaagcacgtccggatttcagtcatgaaaagcccgag
tcgttcaaaccacgatcgttccgcgaccgtgaagagtttacttccgaaggcaagaagcca
ttttcaaagcctgaaaggccgttttcaaaaacagataagcctttttcaaaagcagacagg
cctttttcaaaaacggataaacctttttcaaagtcggacaaacctttctcaaagtcagac
aagcctttttcaaagtcggacaagccttttccgagaaccgaggcgcctttctcgaaatct
gaaaagccttctttccgggaatctggccgtagtaagggatttggcaaaccagagcgcgaa
agcgaacgccccttcggtttcaagcaaaaagaaaactcaggttttaaaaaaaaagacgat
tctgagcccagggatcatgcagctccccaatcgggaagtgcggagccggaagcggaccaa
agcggactggaaagaagagtaggacgctacaaatcggctcccggatatgatctctccggc
tatgaaaaaaggaccggcaaaaaggtgaaggaagacccttccgacatccgcctgaaccgc
tacattgctaatgcaggcatttgttcaaggagggaagctgatgaccttattgcttcgggg
caaatttcggtaaatggtaaaactgtgaccgaaatgggctacaaagtaaagctgagcgat
gttgtcaaatatggcaaacgtgcgctgaaccccgaaaaaatggtgtatatcctgattaat
aaaccgaaggattacattacgactacagatgatccggaagaacgcagaaccgtactcgac
ctgatcaaaggagcttgcgacgaacgtgtttacccggttggccgcctcgaccgcaatacc
acgggtctgctgctgctgaccaatgatggcgaactcgccggaaagctgacgcatccatca
actggcattggcaaaatttaccaggcggagcttgaccgaccaattgcaacagaggatttt
gaaaaattacagcagggtgtggcgctggaagacggtttcattcgtcctgacgaagtaggt
attgttactccggatgcgatggtcgtaggacttgaaattcatagtggacgtaaccgggtg
gtacgccgcatcttcgaacatttaggctatgaggtgaaaaagctggaccgtactgtattt
gcaggcctcaataagaaggacctgccaagaggtaaatggcggtttttgacagagagggaa
gttattaagcttaaatatatgctgtaa
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integrated database retrieval system
