Dyadobacter sandarakinus: HWI92_20020
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Entry
HWI92_20020 CDS
T07768
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dsn
Dyadobacter sandarakinus
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsn03009
]
HWI92_20020 (rimO)
Enzymes [BR:
dsn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HWI92_20020 (rimO)
Ribosome biogenesis [BR:
dsn03009
]
Prokaryotic type
ribosomal protein modification factors
HWI92_20020 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QRR03031
LinkDB
All DBs
Position
complement(4885473..4886783)
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AA seq
436 aa
AA seq
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MKTKGIVKNKVNIVTLGCSKNLVDSEVLYTQLKGNGFNVAHESKKDDSQIVVINTCGFID
GAKEESIETILRYADAKAAGIVDKVYVTGCLSHRYKDELSVEIPTVDAWFGTNELPRLLK
TLKADYKHELVGERLLTTPAHFAYLKIAEGCDRPCSFCAIPLMRGGHISRPIEELVKEAQ
SLAKRGTKELILIAQDLTYYGLDIYKKRNLSDLMLRLSDVEGIEWIRLQYAYPAGFPMDI
LDVMNERSNICKYLDMPLQSGSTEILRSMRRGITREKTEALISTIRDKVPDVALRTTLIV
GHPGETEALFDETYEFVEKMRFDRLGAFQYSHEDNTHSHTMEDDVPAEIKQERADAIMEL
QQGISYDHNQAKVGQTFKVLFDRKEGGHFIGRTQFDSPEVDNEVLIPAAQYVRVGDFAEV
KITSAEEFDLYGQLIS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaaggaatagttaaaaacaaagtcaatatcgtaacactgggttgctccaaa
aaccttgtggactccgaagttctgtacacacagctgaaaggaaacggatttaatgtggcc
cacgaatccaaaaaggacgactcccagatcgtggtgatcaatacctgcggatttattgac
ggtgccaaggaagaatccattgaaacgattctgaggtatgccgatgccaaggctgccggt
attgtagacaaagtatatgttaccggctgcctctctcaccggtacaaagatgagctttct
gttgagattcctacggtagatgcatggtttggcaccaacgagctaccgcgcctgctcaaa
accctgaaagccgattacaaacacgagctcgtcggcgaacgactgcttactacgcctgcc
cattttgcatacctgaaaattgcagaaggctgtgatcgcccgtgcagcttttgtgccatc
ccgctgatgcgcggcggacacatatcccgtcctattgaggaacttgtaaaagaggcgcaa
tcactggcaaaaagaggcaccaaagagctcatcctcattgcgcaggaccttacttactac
ggtcttgatatttataaaaaaagaaacctgtctgacctgatgctgcggctgtccgatgtg
gaaggcattgaatggatcaggctgcagtatgcatatcctgcgggctttccgatggatata
ctggatgtcatgaacgagcggagcaacatttgcaaatacctggatatgccgctgcaatcg
ggatctacggaaatcctccggtctatgcggcgtggaatcacgcgtgaaaaaaccgaggcg
ctgatcagtacgatacgtgacaaagtacctgatgttgcattgcgtaccaccctgatcgta
ggacatcccggcgagaccgaggcattgttcgatgaaacgtatgagtttgttgaaaaaatg
cgttttgaccgtctgggggcatttcagtactctcacgaagacaatacccactcccataca
atggaagacgacgtacctgctgagatcaagcaggagcgtgctgatgccattatggagttg
cagcaggggatttcatacgatcacaaccaggccaaagtgggccaaaccttcaaggtactt
tttgaccggaaagagggcgggcattttataggccgtacccaatttgactctcccgaagtt
gacaatgaagtacttatccctgcggctcagtatgtgcgggtcggtgactttgcagaggta
aaaattacatcggcagaggaatttgacctttatggacaactaatttcctga
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