KEGG   Dyadobacter sandarakinus: HWI92_21385
Entry
HWI92_21385       CDS       T07768                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dsn  Dyadobacter sandarakinus
Brite
KEGG Orthology (KO) [BR:dsn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsn03400]
    HWI92_21385
Enzymes [BR:dsn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HWI92_21385
    5.6.2.6  RNA 3'-5' helicase
     HWI92_21385
DNA repair and recombination proteins [BR:dsn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HWI92_21385
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2
Other DBs
NCBI-ProteinID: QRR03285
UniProt: A0ABX7IBJ2
LinkDB
Position
5183799..5186261
AA seq 820 aa
MAKSPGHTVVEQWFKSKKWKWAPFQQEAAKAYLAGKSGLVNAPTGSGKTYSLWVPILIRH
INAVAKPSSRAGKGLQVLWITPLRALSKDLFRNMEAAALEMNTTWRIGIRTGDTNTKERG
DQKKQMPDALIITPESLHMLFSQKNASELFKNLHTVVVDEWHELMGSKRGTQTELALARL
RTLNPDLQTWGISATIGNLEEARKVLLGMRFPIENSVVVKADTSKKILVESVLPERVETL
PWSGYMGIRLVDKVIEIVNKSSTTLLFTNTRAGTEIWYRTIIDKYPEFAGIMALHHASLD
REIRDWVEEALHEERLKLVICTASLDLGVDFRPVDTVIQVGSPKSIARFIQRAGRSGHRP
GVDSRIYFCPTNALELIEAVSLREGVEKNILEDRPPIVQAFDVLAQWMITLAVGEGFDEV
QLFEEVCDAYGYQYLNREEWEWLLGYITTGSSSLTVYDEYKKVERVNGRYMVTSRRVAQR
HRLSMGTIVSDAGIKVKLQSGKYLGTVEESFATWMKAGDVFTFAGMTVEFVRMHEMTLTV
KKAEGKKSFLVRWAGSRMPLSSQLSAFVRERLSDALDNPLKEVELLKLEPLLELQKERSM
IPRTSELLIEQCETREGYHIFIFPFEGRLVHEGMSILLAYRLSRIKPITFSVAMNDYGFE
LLSDQYVNMEAVLKDTDLFSTKHLVDDIYQSVNATEMAKRKFREIASIAGLMFQGYPGQN
IKTRHLQASSSLLFNVMTKYESNNLLVGQAYQEVLTYQLEEVRMRNALNRIATQTIRIRQ
TEKPTPFSFPIMVDRLREQLTSEKLEDRVQKMIKQYSNAD
NT seq 2463 nt   +upstreamnt  +downstreamnt
ttggccaaatctcccggacatacggttgttgaacagtggtttaaatcaaagaaatggaag
tgggccccttttcagcaagaggctgccaaagcataccttgcaggcaaaagcggtcttgta
aatgcaccgacaggcagcgggaaaacctactcgctttgggttccgatcctgatccggcat
atcaatgccgtggcaaaaccctcctcccgtgcaggtaaaggattgcaggtactctggatc
acgcccctccgcgcattgtccaaagacctcttccggaatatggaagcagctgcgctcgaa
atgaacactacctggcgcatcggtatccgtaccggcgataccaacaccaaggagcgcggc
gaccagaaaaagcaaatgcctgatgcactcatcatcacgcccgaaagcctgcacatgctt
tttagccaaaaaaatgcgtctgaattgttcaaaaacctgcataccgtcgttgtggacgag
tggcatgagctgatggggagcaagcgtggtacccagactgaacttgcgctcgcacgcctg
cgtacgctgaatcctgacctgcagacctggggaatctctgcaaccatcggtaacctcgaa
gaagcgcgtaaagtactgctcggcatgcgcttcccgatcgaaaactcagtcgtagtgaaa
gctgatacctcaaaaaagattcttgttgaaagtgttttgcccgagcgcgttgaaaccctg
ccatggtcgggctatatgggcatcaggctggtagataaagtcattgaaattgttaataaa
agcagcacgacgctactttttacaaatacccgcgcaggtaccgaaatctggtaccggaca
atcattgataagtatccggagtttgcaggcattatggcattgcaccatgcttccctcgac
cgtgaaatacgcgattgggtggaggaggcattgcacgaagagcgtctcaagctggtcatc
tgtactgcaagtctcgacctcggggtggatttcaggcccgtagacacggtcatacaggtt
ggcagccctaagagcatagcgcggtttatacaacgtgcaggccggagcggccaccggcct
ggtgtcgacagccgcatttatttttgtcctaccaatgcactcgaactcattgaggctgtt
tcactgcgtgaaggggttgaaaagaacatactggaagatcgtccgccaattgtacaggct
tttgatgtactggcacaatggatgatcacactcgcggtaggcgaggggtttgacgaagtt
cagctttttgaagaggtatgtgatgcttacggataccagtacctcaaccgggaagagtgg
gagtggctgctgggctacatcactaccggcagctcctcgctgaccgtttacgacgagtat
aaaaaagtagagcgtgtcaatgggcgctatatggtgaccagccggcgcgtagcccagcgg
caccgcctcagcatgggtactattgtttccgacgccggcattaaagtaaagttgcaaagc
ggcaagtacctgggcacggtggaggagtcctttgcaacctggatgaaagcaggagatgta
tttacgtttgcaggtatgactgtggagtttgtccggatgcacgaaatgacccttactgtc
aaaaaagcggaaggtaaaaaaagcttcctggtgcgctgggcaggcagccgcatgccgctt
tcgtcccagttgtcggcgtttgtgcgggaacggctttccgatgcgctggacaatccgctc
aaagaggtggagctgctcaaactggaaccgctgctcgaactgcagaaagagcgctccatg
attcccagaaccagtgaactgctgattgaacagtgtgaaacgcgggagggttaccacatt
ttcatttttccattcgaaggacggctggtgcatgaaggcatgtccattttactcgcatac
cggctgagccgaatcaagccgattacattctccgtggcaatgaacgattacgggtttgaa
ttgttaagtgaccagtatgtgaacatggaggcggtgttaaaagacacagatcttttctcg
accaaacacctggtggacgacatttaccagagcgtgaatgcgactgaaatggcgaagcgt
aaattccgcgaaattgcctccattgcagggttgatgtttcagggatatccgggtcagaat
ataaaaacaaggcatttgcaggcttccagctcactgctttttaatgtaatgaccaaatat
gaaagtaataacctgctggtggggcaggcttaccaggaagtactcacctaccagctggaa
gaagtacggatgcgcaatgccctgaaccgcattgcgacccagacaatccggatcaggcag
acggaaaaaccaacccctttttcgtttccgattatggtggaccgcctccgggagcagctg
acgtcggaaaagctggaagacagggttcagaaaatgatcaaacagtatagtaatgcagat
tga

DBGET integrated database retrieval system