Dyadobacter sandarakinus: HWI92_21820
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Entry
HWI92_21820 CDS
T07768
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn00061
Fatty acid biosynthesis
dsn00071
Fatty acid degradation
dsn01100
Metabolic pathways
dsn01212
Fatty acid metabolism
dsn02024
Quorum sensing
dsn04146
Peroxisome
Module
dsn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HWI92_21820
00071 Fatty acid degradation
HWI92_21820
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HWI92_21820
09145 Cellular community - prokaryotes
02024 Quorum sensing
HWI92_21820
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dsn01004
]
HWI92_21820
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsn04147
]
HWI92_21820
Enzymes [BR:
dsn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HWI92_21820
Lipid biosynthesis proteins [BR:
dsn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HWI92_21820
Exosome [BR:
dsn04147
]
Exosomal proteins
Exosomal proteins of breast milk
HWI92_21820
Exosomal proteins of breast cancer cells
HWI92_21820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QRR03363
UniProt:
A0ABX7IE19
LinkDB
All DBs
Position
complement(5280293..5282017)
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AA seq
574 aa
AA seq
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MISTPENTFPWLRHYPEGIPAEINPDAYTSLLEMMENSFRQYADQPAYTNMGKAITFEKL
DQLTQDFAAYLQSIGLSKGDRIAIQMPNLLQYPVAMLGALRAGLVIVNTNPLYTPREMQH
QFRDSGVKAIVILANFASNLQKVLAETQIQHVIITEIGDLLGFPKKLIVNTVVRYIKKMV
PSYQIAGMTSFTNALELGSQLTYHRPNISGLDIAFVQYTGGTTGISKGALLTHRNLIANV
EGITEWLHSKLRISPPTGQLTMVGALPLYHVFALTINGLCGVKWGALNLLITNPKDIPGF
IKELKKHRFHIFPGLNTLFNGLLNNEDFTKVNFRELKITIAGGMALQKVVADRWQRLTGC
PLVEGYGLSETSPVLSVNPLDGKHRQGTIGLPFPSTEMRILKDDDTWATPGERGEICARG
PQIMLGYYNRPDETAKVIFEDSSGRWFKTGDIGIEDEDGFFKIVDRKKDMILVSGFNVYP
NEIEDVMSRCPGVLEVACIGIPDERSGEAVKLYVVRKDPALTEEDVKSYCKENLTAYKRP
RLIEFRQELPKTNVGKILRRALREEAAGTASEKA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgatttccacacccgaaaatacatttccctggctccggcattatcccgaaggtataccc
gcagaaatcaatcccgacgcatatacatcgctgctggaaatgatggaaaacagcttccgc
cagtatgcagaccagccggcctataccaacatgggcaaggccattaccttcgaaaaactg
gatcagcttacacaggattttgctgcttatctccaaagtatcggtctgtcaaagggtgac
cgtattgccattcaaatgcccaatctgctgcaatatcccgtagcgatgctgggcgcactc
cgggcgggactggtcattgtgaataccaatcccctgtacaccccgcgtgaaatgcagcac
cagttcagggactccggggtaaaggcgattgtaatcctggccaactttgcttccaacctg
cagaaggtacttgccgaaacacagatccagcacgtcattattactgaaataggcgatctg
cttggttttcccaagaaactgattgtcaatacggtggtcaggtacattaagaaaatggtc
ccttcctaccagattgcaggcatgacctcttttaccaatgcactggaacttggatcacag
cttacctaccatcgccccaatatatccgggctcgacattgcatttgttcagtatacggga
ggcacgacgggcatttccaaaggtgcactgcttacgcacagaaacctgattgccaatgtg
gaaggtattacggagtggctgcattcgaagctgcggatatctccgcccaccggtcagctc
accatggtaggagccttgccgctgtatcatgtttttgcattaacaatcaacgggctctgt
ggtgtcaaatggggcgcgctgaatttgctgatcaccaatcccaaggatatacccggtttt
atcaaagagctcaaaaaacacaggttccatattttcccggggctgaatacacttttcaat
ggcttgctgaacaatgaggattttaccaaagtaaacttccgggagctcaaaataaccatt
gcaggcggcatggccctgcagaaagtagtggccgacaggtggcaaaggctgacgggctgt
ccgctggtggaaggctatggcctgtccgaaacgtctcccgtactatccgtgaatccattg
gacggaaaacacaggcagggtaccatcgggcttccttttccgagtactgaaatgcgtatt
ctcaaagacgacgatacctgggccacgccgggtgagcggggtgaaatttgtgcccgcggg
ccacagatcatgctgggatactataaccgtccggatgaaactgccaaggtgatctttgaa
gacagcagcggccggtggttcaagacaggtgatatcggcattgaggatgaagacggtttt
ttcaaaatcgtggaccggaaaaaggatatgatcctggtgtcgggcttcaatgtttatccc
aatgaaattgaggacgtcatgtcgcggtgcccgggcgtgctggaggttgcctgcataggt
atccccgacgagcgttcgggtgaggctgtgaagctgtacgtagtacgcaaggatcctgca
cttaccgaggaagatgttaaatcgtactgcaaagaaaacctgactgcctacaagcgcccg
cgtctgattgagttcaggcaggagcttcccaaaaccaatgtaggcaaaatattgcgccgg
gccctgcgggaagaagcagcggggacagcctctgaaaaggcgtaa
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