Dyadobacter sandarakinus: HWI92_22700
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Entry
HWI92_22700 CDS
T07768
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
dsn
Dyadobacter sandarakinus
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsn02000
]
HWI92_22700
Transporters [BR:
dsn02000
]
Other transporters
Pores ion channels [TC:
1
]
HWI92_22700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
FecR_C
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
QRR03522
LinkDB
All DBs
Position
5497009..5500464
Genome browser
AA seq
1151 aa
AA seq
DB search
MKVKLSAKQWVGLGLVVMVQSYQPLHAQAIAFAASPARSASGRQEMKLKNVLLDLQRHYG
VEIVFEDRLVGSVNVTSASLDFSRPIEKNLETILGQNGLKYRKTRKNTFVITEDKLRENT
PEKAGKKESAALPESPVNPENEVVPTVAVVDRSVRGKVADESGNGLPGVSVVLKGTQRGT
STGAAGEFALDVPDGSGNILVFSFVGYKSQEVTVGNQAEVSVSMMPDENALDEVVVVGYG
TVKKSDLTGAVGTIKGEVLQERPASSLNQGLSGRVAGVNVSSNSGRPGGRANIRIRGASS
ISVSNNPLYVIDGVILNAVDLQNGSTPIDYINPNDIASIEVLKDASSTAIYGARGANGVI
LITTKRGTSGGGKITYDTDFSIGVAPKKLPVLNSREFLQVEEQAYANAAKYDPVGWATGT
KYTDPRTKRTNPLLFDASGNPLYDTDWQKEAFQKALIQNHQLGLTGGSEKGSYGAFLNYR
NENGIVRESWQKRYSGRFVFDSQIKSWLKVGGSLGYTDQNEKQVDQLGGGGITAMRQVLE
ALPIIPVKYPDGRWASNRDYPGMEGGDSPLRVVNERLYYLKTQTMLGNMYAAFHLADGLD
LRSTLGTNVINQRLDYFAAAGLQYISNNGDAQVTNNRYNSWQFENYLTYNKEFAKIHSLN
AMLGLSWQHVDRFENMARSQNFTDTYFEYNNLGAGATALAPSSFASAYGLNSYFARLNYG
LMDKYLVTFTGRIDGSSKFGDANRYAFFPSAAVAWRVSEEEFLKGVHAITNLKIRASYGA
TGNSEIPAYRALAGMSSYDVIFGGSRNIGIGVGRMSNSALQWEKTQQVDLGIELGLFSNR
LSFELDLYRRKVNDMLLDAPLPMSSGYASIFTNIGSMENKGVEFAINSTNIKAGDFSWST
TFNISVNKNKVLALSGGSDIYSGATVIRVGEPVGSFFGRVHEGTWSTAEAEQAKKYNMLP
GDVKYKDLNGDGTINDNDRTIIGKGIPDGFGTFLNTFQYKAWSLTVDLQYMYGNDVLDRS
IHSAEDRQGIANSYKTVLNAWTETNQNTPIAQIRPINAYYTTNNDSHKVTDASFIRGRNL
LLAYTFSPNVVSRLKLDRLRVFGSVQNFFVTTKYRGYDPEVSNSGSPFDQGFGLYDYPKP
RVFMLGLNIGL
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaagctatcagccaagcaatgggtggggctcggacttgtcgtcatggtgcag
tcgtaccagcctctccatgcacaagccattgcctttgccgcttctccggcccgctctgca
agtggcaggcaggaaatgaagctcaaaaatgtgctccttgatctgcagcgtcattatggg
gtggagattgttttcgaagaccgcctcgtagggtcggtaaacgtcacatccgcctccctc
gatttttcccgccctatcgaaaaaaacctggaaacgatccttggacaaaatgggcttaaa
taccggaaaacgaggaagaatacctttgtgattacggaggataaactgcgggaaaatacc
cctgaaaaggctggaaaaaaggagtcggcggccctgcctgagtcgcctgtgaaccctgaa
aacgaagttgtgccgactgtggccgtagtggatcgttcagtgagaggcaaggttgcggac
gagtcggggaatggacttccaggcgtaagtgtggtattgaaaggtacccagcgtggtact
tctacgggcgcagcgggcgaatttgcactggacgtccccgacggaagcggcaacattctg
gtatttagttttgtagggtacaaatcgcaggaagttactgtgggcaatcaggcagaggta
tctgtaagcatgatgcctgatgaaaatgcattggatgaagtggtcgtggtgggttacggt
actgtgaaaaaatcggatcttaccggggccgtgggtacgatcaaaggtgaggtattgcag
gagcgtcccgcatcttcgctcaaccagggattgtcaggccgggtagcgggggttaacgtt
tcctctaactcgggacgtccgggtggacgcgccaatatccgtatccgcggtgccagctcc
atcagcgtgtccaacaatccgctgtacgtgattgacggggtgatcctgaatgcagtagac
ctgcagaatggcagtacaccgatcgattacattaaccctaatgatattgcgtctatcgag
gtattgaaagatgcgtcgtcaacggcgatttacggagcccggggtgccaatggtgtaatc
ctgatcacaaccaagcgtggtacatccggcggaggaaaaatcacttatgataccgatttc
agcatcggagttgcacccaagaaattgcccgtgctgaactcgcgcgaatttcttcaggta
gaagaacaggcctacgccaatgcagccaagtacgatccggttggatgggctacgggtacc
aagtacaccgatccgcgtaccaagcgcaccaatccgctcctttttgatgcaagtggaaat
ccattgtatgatacagactggcagaaagaagcgtttcaaaaagccctgattcaaaatcac
cagctcggccttaccggcggcagtgaaaagggcagctacggtgccttcctcaactaccgg
aacgaaaacggtatcgtccgtgaatcatggcagaaaaggtactcgggccgctttgttttt
gattcacaaataaaaagctggctcaaagtaggcggcagccttggctataccgatcagaat
gaaaagcaggtggaccagctgggcggcggaggtattacggccatgcgccaggtattggaa
gctttgcccattattcctgtcaaatatcctgacggccgctgggcaagcaaccgtgattac
ccgggaatggaaggtggcgacagcccgctgcgtgtggttaatgagcgcctgtattatctt
aaaacccagaccatgctgggcaatatgtatgctgctttccacctggccgacggactggat
ctgcgctcgacactcggtactaacgtgatcaaccagcgcctggactactttgcagcggcc
ggtctgcagtacatttccaacaatggggatgcccaggttacgaacaaccgctacaattcc
tggcaatttgaaaactacctgacctataataaggagtttgcaaaaattcactccctgaat
gccatgctgggtttgtcgtggcagcacgtggatcggttcgaaaacatggccagaagccag
aactttactgatacctatttcgaatataacaacctgggagccggtgctacggcgctggcg
ccttcgtcttttgcatccgcatacggcctgaactcgtactttgcacggcttaactatggt
ttaatggacaagtacctcgtcaccttcacaggcaggatcgatggttcgtccaagttcggg
gatgctaaccgctatgcattttttccatcggctgccgtcgcctggcgtgtatccgaagaa
gagttcctgaaaggggtgcatgcgatcacaaatttgaaaatcagggccagctatggtgct
accggtaactccgaaatcccggcttaccgtgcattggcagggatgtcgagctacgatgtg
atcttcggcggctcccgcaacatcggtatcggtgtgggcaggatgtccaactctgcattg
cagtgggagaaaacgcagcaggttgatctgggtatcgaactgggacttttctctaaccgg
ctcagctttgagcttgatctctaccgcagaaaagtaaacgatatgctcctggatgcaccc
ctcccgatgagcagcgggtatgccagtatctttaccaacatcggcagtatggaaaacaag
ggtgttgaatttgctattaattctaccaacatcaaggcgggagatttttcttggagcact
actttcaacatttctgtcaacaaaaataaagtgcttgcattgtcaggaggcagcgacatt
tattcaggcgctacggtcatcagggtaggggagcctgtgggttcattctttggccgggtc
catgaaggtacatggtctaccgcagaagctgagcaggccaaaaagtacaatatgctgccg
ggcgatgtgaaatacaaggatttgaatggagacggaaccatcaacgacaatgaccgtacc
atcatcggtaaaggtattcccgatggtttcggtactttcctgaatacgttccagtacaaa
gcctggtcgctgaccgttgacctgcagtacatgtatggaaacgacgtgctcgaccgcagt
atccactcggcggaagaccgccagggcattgccaacagttacaaaaccgtactgaatgca
tggaccgaaaccaaccagaacacgccgattgcgcagatccggcctattaatgcctactat
acgaccaacaatgacagccacaaggtaaccgatgcatcgtttatccggggccgtaacctg
ctgctggcttacactttctcacccaatgtggtatcccgactgaaacttgaccggctgcgt
gtatttgggtcagttcagaacttctttgttacgacaaaataccgcgggtacgatccggaa
gtgtccaactcgggctccccgtttgatcagggatttggcttgtacgattatccgaaacca
agggttttcatgttgggcttgaacataggtttgtaa
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