Dyadobacter sandarakinus: HWI92_23260
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Entry
HWI92_23260 CDS
T07768
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn00521
Streptomycin biosynthesis
dsn00523
Polyketide sugar unit biosynthesis
dsn00525
Acarbose and validamycin biosynthesis
dsn00541
Biosynthesis of various nucleotide sugars
dsn01100
Metabolic pathways
dsn01110
Biosynthesis of secondary metabolites
dsn01250
Biosynthesis of nucleotide sugars
Module
dsn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HWI92_23260 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HWI92_23260 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HWI92_23260 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HWI92_23260 (rfbB)
00525 Acarbose and validamycin biosynthesis
HWI92_23260 (rfbB)
Enzymes [BR:
dsn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HWI92_23260 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
QRR03623
LinkDB
All DBs
Position
complement(5614502..5615557)
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AA seq
351 aa
AA seq
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MKKILITGGAGFIGSHVVRRFVNFHPEYHIVNLDALTYAGNLENLRDVEQASNYTFVKGD
IVDAAFIDRLFEEHDFSGVVHLAAESHVDRSISDPMSFVLTNVVGTVNLLNAAKKAWKDD
FSDKRFYHVSTDEVYGELHDPGTFFVETTKYDPRSPYSASKASSDHFVRAYHNTYKLPVV
ISNCSNNYGPNHFPEKLIPLMIHNIIQQKPLPVYGKGENIRDWLFVEDHAIAIDVIYHKG
VNGETYNIGGHNEWKNIDLVHLLCSIMDRKLGRPEGESKKLITYVTDRAGHDLRYAIDAT
KLSEELGWKPSLQFAEGLERTVEWYLTNQDWLNNVTSGTYQKYYDEMYLDR
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatactgatcaccggaggggctggttttatcggctcgcatgtcgtacgccgt
ttcgtcaactttcatcccgagtaccacattgtcaatcttgacgcacttacctatgctgga
aacctcgaaaacctgagggatgtggagcaggcttccaattatacctttgtcaaaggggat
attgtagatgctgcattcatcgacaggctttttgaagagcacgacttttcaggtgtggtg
caccttgctgctgaaagccacgtggaccgctcgatttcggatccgatgtcgtttgtgctg
accaatgtagtaggtactgttaacctgctgaatgcggccaaaaaagcatggaaagacgat
ttttctgataaaagattttaccatgtatcaacagatgaggtgtacggagagctgcatgat
ccgggtactttctttgttgaaactaccaaatacgatccccggtcgccctattcagcttcc
aaggcatcatccgaccattttgtaagggcttaccataatacctacaagctgccggtggtc
atttccaactgttccaacaactacggtcccaatcactttcctgagaagctgatcccgctg
atgatccataacatcatccagcagaagccgcttcctgtttacggaaaaggtgaaaacatc
cgtgactggctgtttgtcgaggatcatgcaatcgccattgatgtcatctaccacaaaggc
gtaaacggggaaacctacaatatcggcgggcataacgaatggaagaacattgaccttgtg
catctgctctgcagcatcatggaccgtaaactgggcaggcccgaaggtgaatccaaaaag
ctgattacttatgtcacagaccgtgcaggacacgatttgcgctacgcaatagacgctacc
aagctgtcggaagaactgggctggaaaccttccctgcagtttgccgaaggtcttgaacgc
actgtagaatggtacctcaccaaccaggactggctcaacaacgtcacctcaggcacatac
cagaaatactacgacgaaatgtaccttgaccggtaa
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