Dyadobacter sandarakinus: HWI92_23955
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Entry
HWI92_23955 CDS
T07768
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dsn
Dyadobacter sandarakinus
Pathway
dsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWI92_23955 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsn03019
]
HWI92_23955 (groL)
03110 Chaperones and folding catalysts [BR:
dsn03110
]
HWI92_23955 (groL)
03029 Mitochondrial biogenesis [BR:
dsn03029
]
HWI92_23955 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsn04147
]
HWI92_23955 (groL)
Enzymes [BR:
dsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HWI92_23955 (groL)
Messenger RNA biogenesis [BR:
dsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HWI92_23955 (groL)
Chaperones and folding catalysts [BR:
dsn03110
]
Heat shock proteins
HSP60 / Chaperonin
HWI92_23955 (groL)
Mitochondrial biogenesis [BR:
dsn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HWI92_23955 (groL)
Exosome [BR:
dsn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HWI92_23955 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HWI92_23955 (groL)
Exosomal proteins of breast cancer cells
HWI92_23955 (groL)
Exosomal proteins of colorectal cancer cells
HWI92_23955 (groL)
Exosomal proteins of bladder cancer cells
HWI92_23955 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
QRR03751
UniProt:
A0ABX7ICB9
LinkDB
All DBs
Position
complement(5778658..5780289)
Genome browser
AA seq
543 aa
AA seq
DB search
MSKKIFFDTEARDKVKRGVDTLADAVKVTLGPRGRNVVIDKKFGSPSITKDGVTVAKEID
LKDPIENMGAQLVKEVASKTADSAGDGTTTATVLAQAIYSIGVKNVAAGANPMDLKRGID
KAVSAITKDLESQKKNISTSREIAQVATISANHDEEIGNMIAEAMEKVGKEGVITVEEAR
GTETEVKTVEGMQFDRGYLSPYFVTNTEKMEAELERPFILISEKKVSSMKELLPVLEAVA
QTGRPLLILAEDVDGEALATLVVNKIRGALKVAAVKAPGFGDRRKAMLEDIAKVTGGTVI
SEEQGYKLENATLEYLGTAEKVIIDKDNTTIVNGSGSPEEISGRVNQIKSQIENTTSDYD
REKLQERLAKLSGGVAILYIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAYIR
ATAALEDLKGSNEDETTGINIIRMALEAPLRTIVSNAGGEPSVVINKVKDGTGAFGYNAK
DNTYQDLLEAGIIDPKKVSRLALENAASIAGLLLTTECVIADEPEEAPAAGGHNHGGGMG
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagaaaatattttttgacacagaagcacgcgacaaggtaaaacgcggtgtggat
acactggctgacgcggtgaaagtaacattgggaccacgtggccgcaatgttgttatcgac
aaaaagttcggttctccaagcatcaccaaagatggtgtaactgttgccaaagaaattgac
ctgaaagaccctatcgaaaatatgggtgctcagctggtaaaagaagtagcttccaaaact
gctgattcagctggtgatggtactactactgcaactgtattggcacaggcgatctattct
atcggtgtgaaaaacgttgctgccggtgctaacccgatggacctgaaacgcggtatcgac
aaagcggtttcagcgatcacaaaagatctggaatcacagaaaaaaaatatctctacttca
agagaaatcgctcaggttgctaccatctccgctaaccacgacgaagaaatcggtaacatg
attgctgaggcgatggagaaagtaggtaaagaaggtgtaatcaccgtggaagaagcgcgc
ggaaccgaaacagaagtaaaaactgtggaaggtatgcagttcgaccgtggttacctgtct
ccatactttgtaaccaacactgagaaaatggaagcggaactggaacgtccgttcatcctg
atctctgagaagaaagtatcttccatgaaagagcttcttcctgtactggaagcagttgct
caaaccggccgtccgctgcttatccttgcagaagatgttgacggagaagcacttgctaca
ttggtagtgaacaaaatccgcggtgcattgaaagtggcagctgtaaaagctccgggcttc
ggtgaccgtcgtaaagccatgctggaagatatcgccaaagttaccggcggaactgtcatc
agcgaagagcagggatacaaactggagaatgctactctggaatacctgggtactgctgaa
aaagtgattatcgacaaggataacacaacgatcgtaaatggcagcggatctcctgaagaa
atcagcggccgtgttaaccagatcaaatcgcagattgaaaacactacttctgactacgac
cgtgaaaaactgcaggagcgtcttgccaagctttccggcggtgtagcgatcctttatatc
ggtgctgcaacagaagttgaaatgaaagagaaaaaagaccgtgttgatgatgcattgcat
gcaacccgtgcagcggttgaagaaggtatcgttgcaggtggtggtgtagcttacatccgt
gcaactgctgctcttgaagatctgaaaggaagcaacgaagacgaaacaaccggtatcaat
atcatccgcatggcgcttgaagctcctttgagaacaatcgtttccaatgcaggtggcgag
ccttcagttgtgatcaataaagtaaaagacggtacaggtgctttcggttacaacgcgaaa
gacaacacctaccaggatcttcttgaagcgggtatcattgaccctaagaaagtatcccgt
ctggcgcttgaaaatgcagcatctatcgcaggtctgttgctgacaacagaatgtgtgatt
gctgacgagccggaagaagctcccgcagcaggtggccacaatcacggcggcggaatgggt
ggcatgatgtaa
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