Dickeya solani IPO 2222: A4U42_03245
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Entry
A4U42_03245 CDS
T04410
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00040
Pentose and glucuronate interconversions
dso01100
Metabolic pathways
dso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A4U42_03245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4U42_03245
Enzymes [BR:
dso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A4U42_03245
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ANE74433
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Position
796916..798094
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AA seq
392 aa
AA seq
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MNKASGRSFTRTSKCLLAALIAGMMTSGVSAAELVNSKALESAPVAGWASQNGSTTGGAA
ATSDNIYVVTNISEFTSALSAGAVAKIIQIKGTVDISGGTPYKDFADQKARSQINIPANI
TVIGIGTDAKFINGSLIIDGTDGTNNIIIRNVYIQTPIDVEPHYEKGDGWNAEWDGMNIT
NGAHHVWVDHVTISDGSFTDDMYTTKDGETYVQHDGALDIKRGSDYVTISNSLFDQHDKT
MLIGHSDTNSAQDKGKLHVTLFNNVFNSVTERAPRVRYGSVHSFNNVFKGDVKDPVYRYL
YSFGIGTSGSVLSEGNSFTIANLSASKACKVVKKFNGSIFSDKGSVLNGSAADLSGCGFS
AYTSAIPYVYAVQPMTTELAQSITDNAGSGKL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcatcaggacgctcttttacccgcacctcaaaatgtctgctggcagcactg
atcgctggcatgatgacctctggtgtttccgccgccgaactggttaatagcaaagcgctg
gaatctgcgcccgtcgctggctgggcgtcgcaaaacggctccaccaccggcggcgccgct
gcaaccagcgacaatatctacgtcgttaccaatattagcgaattcaccagtgcgctcagc
gccggcgccgtcgcaaaaatcatccagatcaaaggcacggtcgatatcagcggcggcacg
ccctacaaagatttcgctgaccagaaagcccgcagtcaaatcaacattccggctaacatc
accgtgatcggaattggcaccgacgccaaattcatcaacggctctttgatcatcgacggt
accgacggcaccaataacatcatcatccgtaacgtctacatccagacgccgattgacgta
gaaccgcattacgaaaaaggcgacggctggaacgccgaatgggatggcatgaacatcacc
aacggcgcccaccatgtgtgggtcgaccacgtcactatcagtgacggcagctttaccgat
gacatgtacaccaccaaagacggcgaaacttacgttcagcacgatggcgcgctggatatc
aaacgtggttccgactacgttaccatctccaacagcctgttcgatcagcacgacaagacc
atgctgattggtcacagcgacaccaactccgctcaggataaaggcaagctgcacgtcacg
ctgtttaacaacgtgttcaacagcgtaaccgagcgcgcgccgcgcgtacgctacggcagc
gtccacagcttcaacaacgtcttcaagggtgatgtaaaagatccggtgtaccgttacctg
tacagcttcggtatcggcaccagcggcagcgtgctgtctgaaggcaacagctttaccatc
gctaacctgagcgccagcaaagcgtgcaaggttgtgaagaaattcaacggctccattttc
tccgacaagggttccgtcctgaatggcagcgccgccgatctgtccggttgtggtttcagc
gcttataccagcgctattccttacgtttacgccgttcagccgatgaccaccgagctggcg
caatccattaccgacaacgcaggctcaggcaaactgtaa
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