KEGG   Dickeya solani IPO 2222: A4U42_03250
Entry
A4U42_03250       CDS       T04410                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
dso  Dickeya solani IPO 2222
Pathway
dso00040  Pentose and glucuronate interconversions
dso01100  Metabolic pathways
dso02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dso00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    A4U42_03250
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A4U42_03250
Enzymes [BR:dso01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     A4U42_03250
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: ANE74434
LinkDB
Position
798529..799743
AA seq 404 aa
MNNSRMSSVSTQKTTGRSALGTKSALAAIIATTMMVSAASAASLQTTKATEAASTGWATQ
SGGTTGGAKASSSKIYAVKSISEFKAALNGTDSSSKIIQITGTIDISGGKAYTSFDDQKA
RSQISIPSNTTIIGIDSKGKFTNGSLVVKGVSNVILRNLYIETPVDVAPHYEDGDGWNAE
WDAAVIDSSDHVWVDHVTISDGSFTDDKYTTKNGEKYVQHDGALDIKRGSDYVTVSNSRF
ELHDKTILIGHSDNNGSQDAGKLRVTFHNNLFDRVGERTPRVRFGSVHAYNNVYIGDVNH
KAYRYQYSFGIGTSGSLLSESNAFTIDNLKKISGRDKECSVVKAFNGKIFSDKGSIINGA
SYNLNGCGFGFSAYSAKIPYKYSAQTITTSLASSISSNAGYGKL
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgaacaactcacgtatgtcttccgtttcaacacagaaaacaacaggacgttctgccctg
ggaaccaaaagcgcgctggcggcgattatcgctaccaccatgatggtctctgccgcttcc
gccgccagtctgcaaaccaccaaagcgacagaagcagcttcaaccggctgggcgacgcag
agcggcggtaccaccggcggcgcgaaagcgtcatcatccaaaatctacgcggtgaaaagc
atcagcgaattcaaagcagcgctgaacggaaccgattcgtcgtccaagatcatccagatc
accggaacaattgatatcagcggtggtaaagcctacaccagttttgacgatcagaaagcc
cgcagccagatcagcattccatccaacaccaccatcatcggtatcgacagcaaaggcaag
ttcaccaacggttcgctggtagtgaaaggcgtcagcaacgttatcttgcgtaacctgtat
atcgaaacgccggtggatgtggcgccgcattacgaagatggggatggctggaacgccgag
tgggatgcggcagtaatcgatagctcagaccacgtttgggtcgatcatgtcaccatcagc
gacggcagcttcaccgatgacaaatacaccaccaaaaacggcgaaaaatatgtgcagcat
gacggcgcgctggatatcaagcgcggctccgactacgttaccgtctccaatagccgcttc
gagctgcatgacaaaaccatcctgatcggccacagcgacaacaatggctcgcaggacgcc
ggcaaactgcgcgtcaccttccacaacaacctgtttgaccgggtcggcgaacgtaccccg
cgcgtacgctttggtagcgtccacgcttacaacaacgtttacatcggcgacgtcaaccac
aaagcctaccgctatcagtacagcttcggtatcggcaccagcggtagcctgctgtctgag
tccaacgcgtttaccattgataacctcaagaagatcagtggccgcgacaaggaatgcagc
gtggtcaaggcgtttaacggcaagatcttctccgataaggggtcgatcatcaacggcgcc
tcgtacaatctgaatggttgcggctttggcttcagcgcatatagcgccaagatcccgtac
aaatattcagctcaaaccatcaccaccagtctggcaagcagcatcagcagcaacgcgggt
tacggcaaactgtaa

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