Dickeya solani IPO 2222: A4U42_03255
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Entry
A4U42_03255 CDS
T04410
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00040
Pentose and glucuronate interconversions
dso01100
Metabolic pathways
dso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A4U42_03255
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4U42_03255
Enzymes [BR:
dso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A4U42_03255
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
ANE74435
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All DBs
Position
800270..801448
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AA seq
392 aa
AA seq
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MNNTRVSSAGTKSLLAAIIATAMMTSAAHAASLQTTKATEAASTGWATQSNGTTGGAKAT
SAKIYAVKNISEFKAALNGTDTDPKIIQITGAIDISGGKAYTSFDDQKARSQLSIPSNTT
IIGIGSNGKFTNGSLVIKGVSNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDSSTN
VWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGH
SDSNGSQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKHSVYPYAYSFGL
GTSGSILSEANSFTLSNLKSIDGKNPECSIVKQFNSKVFSDKGSLVNGSSTTNLDTCGLT
AYKPTLPYKYSAQTMTSSLASSINSNAGYGKL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacactcgtgtgtcttctgcaggaacaaaaagcttactggcagccatcattgcc
accgccatgatgacttccgcagcccacgcagccagcctgcaaaccaccaaagcgacagaa
gcggcctcaaccggctgggcaacgcagagcaacggcaccaccggtggcgccaaagcaacc
tcagccaaaatctatgcagtaaaaaacatcagcgaattcaaagcggcgctgaacggtacg
gataccgaccctaagatcatccagatcaccggggcgattgatatcagcggcggcaaagcc
tacaccagctttgacgatcagaaggcacgcagccagctcagcattccgtccaacaccacc
atcatcggtatcggcagcaacggcaaattcaccaacggttctctggtgatcaaaggcgta
agcaacgttatcctgcgtaacctgtatatcgaaacgccggtagacgtagcaccgcattat
gaaagtggggatggctggaacgccgagtgggatgcagccgttatcgacagctctaccaac
gtctgggttgaccacgtcaccatcagcgacggtagcttcaccgacgacaaatacaccacc
aaagatggtgaaaaatacgttcagcacgacggcgcgctggatatcaagaaaggctctgac
tacgtcaccatttcctacagccgcttcgaactgcatgacaaaaccatcctgatcggccac
agcgacagcaatggctcacaggactccggcaaactgcgcgttactttccacaataacgtg
ttcgaccgcgttaccgaacgtaccccgcgcgtacgtttcggtagcatccacgcttacaac
aacgtctatctgggcgacgtgaagcacagcgtctacccgtatgcatacagcttcggcctt
ggcaccagcggcagcatcctgtctgaagccaactccttcacgctctccaacctgaagagc
attgatggcaaaaacccggaatgcagcatcgtgaagcaattcaacagcaaggtgttctcc
gataaaggctcactggttaacggctcgtcaaccacaaacctggatacctgcggcctcacc
gcttacaaaccgactctgccgtacaaatattcggctcagacaatgacaagcagcctggct
agcagcatcaatagcaacgcaggctacggcaaactgtaa
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