Dickeya solani IPO 2222: A4U42_03425
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Entry
A4U42_03425 CDS
T04410
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4U42_03425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_03425
Enzymes [BR:
dso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
A4U42_03425
DNA repair and recombination proteins [BR:
dso03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A4U42_03425
Prokaryotic type
A4U42_03425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ANE74467
LinkDB
All DBs
Position
839766..840452
Genome browser
AA seq
228 aa
AA seq
DB search
MTTSLTWHDLLAQEKELPYFVNTLSFVHQERTAGKVIYPPQKDVFNAFRFTEFHAVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLVNIYKELANDIPGFEIPSHGFLQSWAQQGVM
LLNTVLTVEAGKAHSHANLGWETFTDKVIEKLNAHREGIVFLLWGSHAQKKGSIIDTQRH
HVLKAPHPSPLSAHRGFLGCHHFSRTNQLLEQQGTTPIDWAPRLPEDA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttccctgacctggcacgacctgctagcccaagagaaagaactaccctatttc
gtcaatacgttgtcgttcgttcatcaggaacgtacagcaggcaaggtgatctatccgccg
cagaaagacgtcttcaacgcctttcgttttactgaatttcacgctgtcaaagtggtgatt
ctggggcaggatccgtatcacggcccgaatcaggcgcatggactgtcattttcagttcgt
ccaggcgtgccggcaccgccgtcgctggtcaatatctacaaagaactggctaacgatatt
cccggatttgaaattccttctcacggctttttgcaaagctgggcgcagcaaggcgtgatg
ttactcaacaccgtactgacggtggaagcaggcaaagcgcattcgcacgccaatctgggt
tgggaaaccttcaccgacaaagtgatcgaaaaactgaacgcgcaccgggaagggattgta
ttcctgctgtggggatcacatgcgcaaaagaaaggcagcattattgatacgcagcgacat
catgtgctgaaagcgccgcacccctcgccattatctgcccatcgtggttttttgggatgc
caccatttctccagaactaatcagttgctggaacaacagggcactacgccgatcgactgg
gccccccgcttgccggaagacgcataa
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