Dickeya solani IPO 2222: A4U42_03545
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Entry
A4U42_03545 CDS
T04410
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00550
Peptidoglycan biosynthesis
dso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A4U42_03545 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dso01003
]
A4U42_03545 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dso01011
]
A4U42_03545 (mrcB)
Enzymes [BR:
dso01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
A4U42_03545 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
A4U42_03545 (mrcB)
Glycosyltransferases [BR:
dso01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
A4U42_03545 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
dso01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
A4U42_03545 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
PBP1b_C
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
ANE74481
LinkDB
All DBs
Position
complement(860552..863044)
Genome browser
AA seq
830 aa
AA seq
DB search
MSRDDREPIGRKHSASRHTPPRKQATRRRRDDDYDDDYEEEYEEDYDDDEEEVMSKRPRK
KRRWLGLLIRLFLIFVVVMSIYGVYLDGEIRSRIDGKVWQLPAAVYGRMVNLEPGMAYSK
KEMVNLLEGMQYREVSRITRPGEFTVQANGIEILRRPFDFPDGKEGQIHAKMIFSNDRLS
QIQNMDNQRNFGFFRLDPKLITMLQSPNGEQRLFVQRSGFPDLLVQTLIATEDRHFYEHD
GISFYSIGRAMLANLTAGRAVQGGSTLTQQLVKNLFLTNERSLWRKANEAYMALIMDYRY
SKDRILELYLNEVYLGQSGNDQIRGFPLASLYYFGRPVNELSLDQQAMLVGMVKGASLYN
PWRNPQVTLERRNLVLKLLQNQQVIDEDLYNMLSARPLGVQPKGGVISPQPAFMQMVRQE
LQQRLGDKTNDLSGVKIFTTLDPVSQDAAEKAVEDGIPALRAARGVKDLESAMVIVDRFS
GEIRAMVGGSDAQFAGFNRAMQARRSVGSLAKPPTYLTALSMPDRYRLNTILADEPISLK
QPNGTVWEPKNYDREFRGRVMLVDALANSLNVPTVNLGMAVGLDQVSDTLQKLGIPQNQI
QAVPAMLLGAISLTPMEVAQEYQTIASGGNRASLSALRSVIAEDGKVLYQSFPQAERAVP
SQAAYLTLYGMQQVVERGTSRSLTVKFGNYHLAGKTGTTNDLRDSWFAGVDGKEVAITWV
GRDNNGPAKLTGANGALTIYRRYLENQTPLPLMLTPPEGITTMSVDSSGNFICNGSAGRA
LPVWTDNPQALCQASQQAVQQPANAPNGQPQQNQQEGGSVPDWIKQMFGQ
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatgaccgcgaacctatcgggcgcaaacatagtgcgtcacgacacactccc
cctcgcaagcaagcgacgcgccgccgcagggatgatgactacgacgacgattatgaagaa
gagtacgaagaagactatgacgacgacgaggaagaagtcatgagcaagcggccgcgtaag
aaacgccgctggctggggttgctgatccggctattcctgatcttcgtggtggtgatgtcg
atttatggcgtttacctcgacggagagattcgcagtcgtatcgacggcaaagtgtggcaa
ctgccggcggcggtgtatggtcgcatggtcaaccttgagccgggcatggcctacagcaaa
aaagagatggtcaatctgctggaaggcatgcaataccgcgaggtcagccgcattacccgg
ccgggcgaattcacggtgcaggccaacggcatcgaaatcctgcgtcgtccgtttgacttt
ccggacggcaaggaaggccaaattcacgccaaaatgatcttcagcaatgaccggttgtcg
cagatccagaatatggacaatcagcgcaatttcggtttctttcggctcgatccgaaactg
atcaccatgttgcagtcgccgaacggcgaacagcgactgtttgtgcagcgctccggtttc
cccgacctgctggtgcaaacgctgattgccaccgaagaccgtcatttctacgagcatgac
ggcatcagtttctactccatcggtcgcgcgatgctggccaacctgacggcgggccgagcg
gtgcagggcggcagtacgctgacccagcagctggtgaaaaacctgttcctgaccaacgaa
cgctcgctatggcgtaaagccaacgaagcctacatggcgttgatcatggattaccgctac
agcaaggatcgcattctggagctgtatctgaacgaggtgtacctcggtcagagcggtaac
gatcagattcgtggttttccgctggccagcctttactatttcgggcggccggtaaacgaa
ctgagtctcgaccaacaggcaatgctggtggggatggtgaaaggggcgtcgctctataac
ccgtggcgtaacccgcaggtgacgctggagcgccgtaacctggtgctgaaactgctgcag
aaccagcaggtcatcgacgaagatctttacaacatgttgagcgctcgcccgctgggcgtt
cagccaaaaggcggggtgatcagcccgcagccggcgttcatgcagatggtgcgccaggag
ctgcagcagcggctgggtgacaagaccaacgacctgtctggggtgaaaatcttcactacg
ctggatccggtgtcgcaggatgcggcggaaaaagcggtggaagatggcattccggcgctg
cgcgctgcgcgcggcgtcaaagatctggaatcggcgatggtgattgtcgatcgttttagc
ggcgagattcgggcgatggtgggcggttccgacgctcagttcgccggtttcaaccgtgcc
atgcaggcgcgccgttcggtcggttcgctggcgaaaccgccgacgtacctgacggcgctc
agcatgccggatcgctaccgcctcaacaccattctggcggatgaaccgatttcgctcaaa
cagccgaacggcaccgtctgggagccgaaaaactacgatcgtgagttccgtgggcgggtg
atgttggtggacgcgctggcgaattcgctcaacgtgccgacggtcaatctggggatggcg
gtggggctggatcaggtcagcgataccttgcagaagctggggatcccgcagaaccagatt
caggcggtgccggcgatgctgctcggcgccatcagcctgacgccgatggaagtggcgcag
gaataccagactatcgccagcggcggtaatcgcgcgtcgctttctgcgctgcgttcggtg
atcgccgaagacggcaaggtgctgtaccagagcttcccgcaggccgaacgggccgtgccg
tcacaggctgcctacctgacgctgtacggtatgcaacaggtggtggagcgcggcacctcg
cgctcgctgacggtgaaattcggcaactaccacctggcggggaaaaccggtaccaccaac
gacctgcgcgatagctggtttgccggcgtcgacggcaaggaagtggcgatcacctgggtt
ggccgcgacaacaatggcccggcgaaactgaccggcgccaatggcgcgctgactatctat
cgccgctatctggaaaaccagacgccgttaccgctgatgttgacgccgccggaaggcatt
accaccatgtcggtggacagtagcggcaactttatctgtaacggcagcgccggccgggca
ttgccggtgtggaccgataacccgcaggcgttgtgtcaggccagccagcaagcggtgcaa
caaccggccaatgcgccgaacggtcagccacaacaaaatcagcaggaaggcggcagcgtt
cccgactggatcaagcagatgttcgggcagtaa
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