Dickeya solani IPO 2222: A4U42_03575
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Entry
A4U42_03575 CDS
T04410
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4U42_03575 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dso03019
]
A4U42_03575 (pcnB)
Enzymes [BR:
dso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
A4U42_03575 (pcnB)
Messenger RNA biogenesis [BR:
dso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A4U42_03575 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ANE74487
LinkDB
All DBs
Position
868781..870148
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AA seq
455 aa
AA seq
DB search
MNRENEPVRADNPPLAITVVPRDQHAISRSDISENALKVLYRLSKAGYEAYLVGGGVRDL
LLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEVIEVATFRGHHEQHQE
QETKNAAQQGQNGMLLRDNIFGTIEEDAQRRDFSINSLYYSIADFTVRDYTNGLNDLHQG
LIRLIGEPETRYREDPVRMLRAVRFAAKLDMRISSETAEPIPRLASLLHDIPPARLFEES
LKLLQAGYGYPTYQLLCEYQLFQPLFPLISRYFTANGESTMERMIVQVLKNTDQRIQNDM
RVNPAFLFSAMLWYPLVEHAQKLTQESGLAYFEAFALAMNDVLDEQCRSLAIPKRITSLI
RDIWQLQLRLSRRQGKRAFKLMEHPKFRAAYDLLSLRAEIENHQELQRLTQWWGEFQVAA
PPRQQVMLNTLDDGPSPHRRSRRPRKRPARRDNAR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
ctgaatcgtgagaatgagcccgtcagggcggacaatccgccgctggcgataacggtcgtt
ccccgtgaccagcatgccatttcacgcagcgacattagtgagaatgcgctgaaagtactg
tatcgcctgagcaaagcgggctatgaggcttatctggtgggcggcggcgtccgcgacctg
ctgttgggcaaaaaacccaaagacttcgatatcaccaccaacgccaccccggaacaggtc
cgcaagttgttccgcaactgccgactagtgggccgtcgtttccgtctggcacatgtgatg
ttcggcccggaagtcattgaggtcgccacattccgcggccaccacgaacagcatcaggaa
caggaaacgaaaaacgccgcccagcaaggccaaaacggtatgctgctgcgcgacaacatt
ttcggcaccatcgaggaagacgcccagcggcgcgacttctccatcaacagtctctattac
agcatcgccgacttcaccgttcgcgactacaccaacggtctgaacgacctgcatcagggg
ttgattcgcctgattggcgaaccggaaacccgctaccgcgaagacccggtgcgtatgctg
cgcgccgtgcgattcgccgccaaactcgatatgcgcatcagctcggaaaccgccgagccg
attcctcgtcttgcctcgttgctgcacgacattccgccggcgcggctgtttgaagaatcc
ctgaaactgctgcaggcgggttacggctatccgacttatcagttgctgtgcgaataccag
ctgtttcagccgctgtttccgctgatcagccgctacttcaccgctaacggcgaaagcacc
atggagcggatgatcgtacaggtgctgaaaaacaccgatcaacgcatccagaacgacatg
cgcgtcaacccggcgtttctgttctccgccatgttgtggtacccgctggtggaacacgcc
caaaaactgacgcaggagagcgggctggcctactttgaagcgttcgccttagccatgaac
gacgtactggacgaacagtgtcgctcgctggcgatccccaaacgtattacctcgctgatc
cgcgatatctggcaattgcaactgcgtctgtcgcgccgtcagggcaaacgcgcctttaag
ctgatggaacacccgaaattccgcgccgcctatgacctgctcagcctgcgtgcggaaatc
gaaaaccatcaggagctacagcgtctgacgcagtggtggggagagtttcaggtcgccgca
ccgccgcgccagcaggtgatgttgaacacactggatgacggcccatcgccgcatcgccgc
tctcgccgtccgcgcaagcgcccagcccgccgggataacgcccggtga
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