Dickeya solani IPO 2222: A4U42_04455
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Entry
A4U42_04455 CDS
T04410
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dso03016
]
A4U42_04455 (truD)
Enzymes [BR:
dso01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
A4U42_04455 (truD)
Transfer RNA biogenesis [BR:
dso03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A4U42_04455 (truD)
Prokaryotic type
A4U42_04455 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ANE74633
LinkDB
All DBs
Position
complement(1046599..1047648)
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AA seq
349 aa
AA seq
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MVMRESLLWLHGEPAATGVLKASADDFFVAEDLGFAPDGDGEHVLVRVRKRGCNTTFVAE
ALAKFAGIPARSVSYAGLKDRHAVTEQWFCLHLPGKAEPTWPAFSLEGCEVLEAQRHRRK
LRIGALRGNHFSLVLREVSDHTDVEARLALIAGEGVPNYFGSQRFGRDGNNLEQARRWAN
DEIRVKDRSKRSFYLSAARSELFNLMASARLATYGTTQVLTGDALQLTGRGSWFVVKPEE
LADVQSRVTAGELQITAALPGQGEPGVLEQALAFEQQCLEDQALLLSLLTRERVDSARRA
VMLHPQDMRWSWRDDATLELHFWLPAGGFATSVVRELLLPVQQENEWAA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgcgtgagtcactgctttggttgcatggcgaaccggccgcaacgggggtgctg
aaggcatcggcggatgatttttttgtcgctgaagatctgggatttgcaccggatggcgat
ggcgagcatgtgctggtgcgtgttcgtaaacgcggctgcaacacgacgtttgtggcggag
gcgctggcgaagttcgccggaattccggcgcgttccgtcagttatgccgggttgaaagat
cgccatgcggtaaccgaacaatggttctgcctgcatttgccgggcaaagcggagccgaca
tggccggcattctcgctggaagggtgcgaagtccttgaagcgcagcgccatcgccgtaaa
ctgcgtattggcgcgttgcgcggcaaccattttagtctggtattgcgcgaggttagcgac
cataccgatgttgaagcccgtctggcgctgatcgccggtgagggcgtgcctaactacttc
ggcagccagcgtttcggtcgtgacggcaacaatctggaacaggctcgccgctgggcgaat
gacgagattcgggttaaagatcgcagcaagcgcagcttctacctttccgccgcccgcagt
gagttattcaatctaatggccagtgcgcgcctggcgacgtatggcacaacgcaggtgttg
accggcgatgcgctgcaactgactggccgcggcagctggtttgtggtcaagccggaagaa
ttggctgacgtgcagtcgcgggtgacggcaggcgagctgcagattaccgccgcattgccg
gggcagggcgaaccaggtgtgctggaacaggcactggcgttcgaacagcaatgcctggag
gatcaggcgctgttgttatcattgctgacgcgcgaacgggtggacagcgcgcgccgcgcc
gtcatgctacacccgcaagacatgcgctggtcatggcgggatgacgccacgcttgagcta
cacttctggctgccggctgggggtttcgccactagcgtggtgcgggaactgctgcttccc
gtgcaacaggaaaacgagtgggcggcctga
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