Dickeya solani IPO 2222: A4U42_04570
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Entry
A4U42_04570 CDS
T04410
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dso03009
]
A4U42_04570 (rumA)
Enzymes [BR:
dso01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
A4U42_04570 (rumA)
Ribosome biogenesis [BR:
dso03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A4U42_04570 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
Methyltr_RsmB-F
MTS
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_11
Methyltrans_SAM
Methyltransf_15
Ubie_methyltran
Methyltransf_23
FtsJ
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
ANE74654
LinkDB
All DBs
Position
complement(1074778..1076112)
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AA seq
444 aa
AA seq
DB search
MAQFYSPNRRVTTRQTLTVTANDLDPFGQGVARHQGKALFIPGVLPGEQAEVQLTEEKRQ
FAHARLRRLLTTSDERVTPRCPHFSVCGGCQQQHASQPLQHRSKAAALTHLMTRETSVVP
PEPEVIAGSAYAYRRRARLALYYQAKTRRLQMGYRQAGSHDLVDIGACPILRPELEALLA
PLRDCLGQLQAVRRLGHVELVLAEQGPLVVLRHLDPLRDADRQALTAFAARHGVALFAAP
EAGALECLHGDMPSYRIAGLSLAFSPRDFIQVNDDINQRMVERALAWLDPQPQDRVLDLF
CGMGNFTLPLAARAGSVVGVEGVAALVDKGQENARRNGLTQVTFYHHDLEEDVTRQPWAS
MGFDKILLDPARAGAPGVMPQIVKLAPRRVVYISCNPTTLARDSKVLMAAGYRLARLAML
DMFPHTGHLESMALFLLGSDGSVK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctccaaaccggcgcgtgacgacccggcaaacccttaccgtgacg
gcgaatgatctggatccattcggacagggagtagcccgccatcagggaaaagcgctgttc
atccccggcgtgttgccgggtgagcaggctgaggtgcagttgacggaggagaaacgccag
tttgcccatgccaggctgcggcggttgttgaccaccagcgacgagcgtgtgacgccgcgc
tgtccgcatttttccgtttgcggcggttgtcagcagcagcatgccagtcagccgttgcag
catcgtagcaaggcggccgcgctgacacacctgatgacgcgggaaaccagcgtcgtccca
ccggagccggaggtgattgccggatcggcctatgcctaccgccgtcgcgcgcgccttgca
ttatactatcaggcgaaaacgcgccggttacagatgggctaccggcaggcaggatcgcac
gatttggtggatatcggcgcctgcccgattttgcggccggagctggaggcgttgctggcg
cctttgcgcgactgtctcgggcagttgcaggccgtccggcggctggggcacgtggagctg
gtgctggccgagcaagggccgttggtggttttgcgccatctggatccgctgcgcgacgcc
gaccggcaggcgctgacggcgttcgccgcccggcacggcgtggcgttgtttgccgcgccg
gaagccggcgcgctggaatgcctgcacggcgacatgccgtcttatcgcattgccgggctg
tcgctggcgttcagcccgcgggatttcattcaggttaatgacgatatcaaccagcgtatg
gtggagcgggcgttggcgtggctggacccgcagccgcaggaccgggtgctcgacctgttt
tgtggaatggggaattttaccctgccgctggctgcgcgcgccggcagcgtggtcggggtc
gaaggcgtggcggcgctggtggacaaagggcaggaaaacgcccggcgtaacgggctgacg
caggtcacattttatcatcatgacctggaagaggacgtcacccggcaaccgtgggcgtcg
atgggatttgataagatactgctcgatccggcccgcgccggcgcgccgggagtgatgccg
cagattgtgaaactggctccccggcgggtggtgtatatatcctgtaaccccaccacgctg
gcgcgtgacagcaaggtgctgatggccgccggttatcgtctggcccggttggccatgctg
gatatgtttccacataccggacatcttgagtcgatggcactgtttttgcttggttccgat
ggctcggtaaagtag
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