Dickeya solani IPO 2222: A4U42_04765
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Entry
A4U42_04765 CDS
T04410
Name
(GenBank) LacI family transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dso03000
]
A4U42_04765
Transcription factors [BR:
dso03000
]
Prokaryotic type
Helix-turn-helix
LacI family
A4U42_04765
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
SpoIIID
Sigma54_DBD
Xre-like-HTH
HTH_Crp_2
HTH_IclR
HTH_Tnp_ISL3
Sigma70_r4
HTH_3
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ANE74691
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All DBs
Position
1124949..1125995
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AA seq
348 aa
AA seq
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MDSNAFSQHGANRKLSNKPVTLQDVATVAGVSVSTVSRVLDERLPPSRSKTAERVRQVAQ
ELGYRRDIMASSLRRGGTGTIGVLVPRLSDMVMALLYEAIFRAAEKQGYFTIVATCGDDP
AQEKAAVESLLDRRVDGLILATSRLDDRLPAELRQQQIPHSLVLRTDGISRSAIGNDEQG
GYLATRHLIDLGHRDIGLIAGPNFTSGARDRRLGFQRAMQEAGLSIRPEWIKESGFGIES
GEAKGLELLTPAHRPSAIFAINDDLAIGVMAAAHRVGLTLGQDLSLVGYNDIPLVARLPV
PLSSVHIPLDHIASLAVELLLSASDGNEPIRRVIPSLIPRSSSAPFNR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggattcaaacgcattttcgcagcacggcgcaaaccggaaactaagcaataagcccgtc
actctgcaagatgtggcgacggtggcaggcgtcagtgtttctaccgtgtcccgggtactg
gacgaacgcctgccgccgtcgcgcagcaaaaccgctgagcgggttcggcaagtcgcacag
gaactgggatatcgccgggatattatggcctccagcttgcgccgcggcggcaccggcacc
atcggcgtactggtgccgcgcctgagcgacatggtgatggcgttgctgtatgaagccatt
ttccgggcagcggaaaaacagggttatttcacgatcgtcgccacctgcggcgatgatccc
gcgcaggaaaaagcggcggtggaatcgctgctcgacagacgggttgacggactgattctg
gcgaccagccgactcgatgaccgtctgcctgccgagttgcgtcagcaacagattccccac
tcgctggtactgcgtaccgacggtatcagccgttctgccatcggcaacgatgagcaaggc
ggttatctggccacccggcatctgatcgatttaggccatcgggatatcggcctgattgcc
ggacccaacttcacatcgggcgcgcgcgatcgtcgtttgggcttccagcgcgccatgcag
gaagcgggcttatcgatacggcccgagtggattaaagaatccggcttcggcattgaatcc
ggggaagcgaaaggattggaactgctcacgcccgcgcatcggcccagcgccattttcgct
attaacgacgatctggcgataggcgtcatggctgccgcgcatcgtgtcggcctgacgctc
ggtcaggatctgtcactggtgggatacaacgatattccgctggtggcgcgtctgccggtg
ccgttgtcttcggtacacatcccgctggatcacatcgcttcgctggcggtagaactgctg
ctttccgcttcagacggcaatgagccaatccgccgggttatccccagcctgatccccaga
agctccagcgcaccgttcaaccgctaa
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