Dickeya solani IPO 2222: A4U42_05015
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Entry
A4U42_05015 CDS
T04410
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dso
Dickeya solani IPO 2222
Pathway
dso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4U42_05015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dso02000
]
A4U42_05015
Transporters [BR:
dso02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A4U42_05015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
ANE74739
LinkDB
All DBs
Position
complement(1177978..1179030)
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AA seq
350 aa
AA seq
DB search
MKKLLSSVLISSALFSTAVMAQDLAALEKAARAEGEVNSVGMPDSWANWKDTWDDLSAKY
GLKHSDTDMSSAQEIAKFAAEKENASADIGDVGVAFGPVAVQKGVSQPYKPTTWEQVPDW
AKDKDGHWAMAYTGTIAFIVDKQQVKEIPHSWADLQKGNYVVTIGDVGTASQASSGVLAA
SFALGGNEKNLKPALDFFAKLAKEGRLGLTNPAIANIEKGEVQVGVVWDFNGLNYRDKIN
KDRFEVLIPSDGSVISGYTTIINKYAKHPNAAKLAREYIFSDAGQINLARGYARPIRAQH
ITLPDDVKAKLLPQEQYKNAHPIADAEAWDKTVKALPRLWQENVIINMKQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgttgtcttctgtgttaatcagcagcgcgttgttttcgaccgccgtcatg
gcgcaggatctggcggcgctggaaaaagccgcccgtgccgaaggcgaagttaacagcgtc
ggcatgccggacagctgggccaactggaaagatacctgggacgatttgagcgccaaatat
ggcctgaaacacagcgataccgacatgtcttccgcgcaggagatcgccaagttcgccgcc
gagaaagagaacgccagcgcggatatcggcgacgtgggcgtcgctttcggtccggtggcg
gtgcaaaaaggcgtgagccagccgtacaagccgaccacctgggaacaggtgccggactgg
gcgaaagacaaggacggccactgggcgatggcttacaccggcaccattgcgtttatcgtc
gataaacagcaggtaaaagagatcccgcatagctgggcggatctgcaaaaaggcaactac
gtggtgaccatcggcgatgtcggcaccgcgtctcaggcgtccagcggcgtgctggcggcc
agtttcgcgctgggcggcaacgagaagaacctgaaaccggcgctggatttcttcgccaaa
ctggcgaaagaaggccgcctcggcctgaccaacccggcgatcgccaatatcgaaaaaggc
gaagtacaggtgggcgtggtgtgggatttcaacggcctgaactaccgcgacaagatcaac
aaggatcgtttcgaagtattgatcccgtctgacggttcggtgatctccggctataccacc
atcatcaacaaatacgctaaacacccgaacgccgccaaactggcgcgtgagtacatcttc
tccgatgccggtcagatcaatctggcgcgcggttatgcccgcccgatccgcgcccagcac
atcaccctgccggatgacgtgaaagccaaactgctgccgcaggaacagtacaagaacgcg
catccgatcgctgacgctgaagcctgggacaagacagtgaaagcgctgccgcgtctgtgg
caggaaaacgtcatcatcaacatgaagcagtaa
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