Dickeya solani IPO 2222: A4U42_05570
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Entry
A4U42_05570 CDS
T04410
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00061
Fatty acid biosynthesis
dso00071
Fatty acid degradation
dso01100
Metabolic pathways
dso01212
Fatty acid metabolism
dso02024
Quorum sensing
dso04146
Peroxisome
Module
dso_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A4U42_05570
00071 Fatty acid degradation
A4U42_05570
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A4U42_05570
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4U42_05570
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dso01004
]
A4U42_05570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dso04147
]
A4U42_05570
Enzymes [BR:
dso01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A4U42_05570
Lipid biosynthesis proteins [BR:
dso01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A4U42_05570
Exosome [BR:
dso04147
]
Exosomal proteins
Exosomal proteins of breast milk
A4U42_05570
Exosomal proteins of breast cancer cells
A4U42_05570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ANE74843
LinkDB
All DBs
Position
complement(1312373..1314178)
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AA seq
601 aa
AA seq
DB search
MKTNSLSHYHLVHRIQQQIAQRPDALAFREWAPEQEQQLDWHQVGERIRRIACGLLGLGV
DVQERVAIFSDNAITWSLADLALLHLRAITVPLYATSAAAQAAFILNDADIRTVFVGGQV
QFDLLMSLRDSCPQLRTIILLDEQIRRRGCDIAVSLQEFEEQAELLVWEPVLRQRVADRD
LSDLFTLIYTSGTTGEPKGVMLDYANMATQLVLHDGRLQTNEQDVSLCFLPLSHVFERAW
SFLIMHRGAQNVYLRDTNQVREAMAAVRPTVMCAVPRFYEKVFSAIHEKVAQAPWHRRTL
FHWGLAQGNKRCLHRQAGKRAGLWNALTYRLADRLVLSRLRQLLGGKVRFLPAAGARLDD
NIIAFFQAMGVRIVYGYGLTETCATVSCWEADHYRLGSVGTPLPGIDVRIGEQNEIEVRG
ATVMRGYYRRPQETEAAFTPDGWFKTGDVGEVDANGNLFITERLKDLMKTSGGKYIAPQH
LEGALGQDRFIEQVAVIADARKYVSALIVPCFEALEEYARSINLGYQDRLELLRHSHILS
LFEQRLRDVQKEFARFEQVKKFTLLPAPFSQEEGELTPTLKLRRKVIHQRYQLEIESMYA
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaattcactctcgcattaccatctggttcaccgcattcagcagcagattgct
cagcgccctgacgcgctggcgtttcgcgagtgggcgcccgaacaggaacaacaactcgac
tggcatcaggtgggcgagcgtatccgccgcatcgcctgcggcctgctggggctgggcgtt
gatgtccaggaacgggtggcgatcttttccgacaacgccatcacctggtcgttggcggat
ctggcgctgctgcacctgcgggcgattaccgtaccgctctatgccaccagcgcggcggcg
caggcggcgttcattctgaatgacgcggatatccgtaccgtttttgtcggcggacaggtg
cagtttgatctgctgatgtcgctgcgcgacagctgtccgcaactgcgcaccattattctg
ctggatgagcaaattcgtcgtcgtggttgtgatatcgcggtatcgctacaggaatttgaa
gaacaggcagaattgttggtgtgggaaccggtgctgcggcaacgggtggccgatcgggat
ttgagcgatctgttcacgttgatctacacctccggcaccaccggcgagcctaaaggggtg
atgctggattacgccaatatggcgacccaactggtgctgcatgatgggcggctgcagacg
aacgaacaggacgtatcgctgtgctttctgccgttgtcgcacgttttcgagcgcgcctgg
agctttcttatcatgcaccgcggcgcgcagaacgtgtacctgcgcgacaccaatcaggtg
cgtgaggcgatggcggcggtccgccctaccgtgatgtgcgcagtgccgcgtttctacgag
aaagtgttcagcgccattcatgaaaaggtggcgcaggcaccgtggcaccggcgcacattg
tttcactgggggctcgcacaaggcaataaacggtgtttacatcgacaggccgggaaacgc
gctggcctgtggaatgcattgacgtatcgtcttgccgatcggctggtgctgtcgcgcctg
cgccaattgctgggaggaaaggtgcgttttctgccggcggcgggcgcgcgtctggatgac
aatattatcgccttcttccaggcaatgggggttcgcatcgtttatggctacggcctgacc
gaaacctgcgccaccgtgtcctgttgggaggccgatcactatcggctggggtcggtcggg
acaccgttgccgggtatcgatgtgcgcattggcgaacaaaatgaaattgaggtgcgcggc
gctaccgtgatgcgcggctactatcgccgcccgcaagagacggaggccgcctttacgccg
gatggctggttcaaaaccggtgatgtgggcgaagtggacgccaacggcaacctgttcatc
actgaacgccttaaggacctgatgaaaacctcgggcggcaaatacattgcgccgcagcat
ctggaaggcgcgctggggcaggaccgctttattgagcaggtcgcggtgatcgccgacgcc
cgcaaatatgtctccgcgttgatcgttccctgctttgaggcgctggaagagtatgctcgc
tcgatcaatctggggtatcaggatcggttggagttactgcgccacagccatattctgtcg
ctgtttgaacagcggttacgcgatgtgcaaaaagagttcgcccgcttcgagcaggtgaag
aaattcaccctgttaccagcgccgttcagccaggaggaaggcgaattgaccccgacatta
aaactccgccggaaggtcattcatcagcgttatcagctggaaatcgaatccatgtacgcc
gactag
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