Dickeya solani IPO 2222: A4U42_06715
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Entry
A4U42_06715 CDS
T04410
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4U42_06715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dso03021
]
A4U42_06715
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_06715
Enzymes [BR:
dso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4U42_06715
Transcription machinery [BR:
dso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4U42_06715
DNA repair and recombination proteins [BR:
dso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4U42_06715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ANE75044
LinkDB
All DBs
Position
complement(1635331..1636320)
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASINMRIKVQRGRGYVPASARIHTEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcggggcttcggccatactcttggt
aacgcactgcgccgtattctgctttcatccatgcctggttgcgcggtgaccgaggttgag
attgatggtgtactgcacgagtacagcaccaaagaaggtgtacaggaagatatcctggaa
atcctgctcaacctgaaagggctggcggtgagagttcaaggcaaagatgaagttattctt
accctgaataaatctggcattggccctgtgactgcagccgacatcacccatgacggtgat
gtcgaaatcgtcaagccacagcatgtgatctgccacctgaccgatgagaacgcatctatc
aatatgcgtatcaaagttcagcgtggtcgtggttatgtgccggcgtctgcccgtattcat
acggaagaagatgagcgcccgatcggtcgcctgttagtcgacgcttgctacagccctgtt
gagcgtatcgcttacaatgttgaagcagctcgtgttgaacagcgtaccgacctggacaag
ctggttatcgagatggaaaccaatggtacgatcgatcctgaagaggcgatccgccgtgcg
gcgaccattctggctgaacaattggaagctttcgttgacttacgtgatgtacgtcagccg
gaagtgaaagaagagaaaccagaattcgatcctatcctgctgcgccctgttgacgatctt
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagctgcttaaaacgcctaaccttggtaaaaaatctctt
actgagattaaagacgtgctggcttctcgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgatgagtaa
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