Dickeya solani IPO 2222: A4U42_07480
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Entry
A4U42_07480 CDS
T04410
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00300
Lysine biosynthesis
dso00470
D-Amino acid metabolism
dso01100
Metabolic pathways
dso01110
Biosynthesis of secondary metabolites
dso01120
Microbial metabolism in diverse environments
dso01230
Biosynthesis of amino acids
Module
dso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A4U42_07480 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A4U42_07480 (dapF)
Enzymes [BR:
dso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
A4U42_07480 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ANE75192
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All DBs
Position
complement(1793596..1794420)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHCGVGFDQLLIVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTSKREINVSTHNGRMVLSVTEDELVQVNMGE
PNFEPQQVPFRAAKPEKTYILRVAEHTVLCGAVSMGNPHCVIQVDNVDTAPVETLGPLLE
SHERFPERANVGFMQVVDPGLIRLRVFERGAGETQACGSGACGAVAVGIQQGLLAADVKV
QLPGGELEIHWDGPGHPLFMTGPATHVYDGFMHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcacggtctgggcaatgatttcatggttgtcgatgccgtgacg
cagaatgtctacttttcaccggagctgatccgtcgcttgtcggaccggcattgcggggtg
gggttcgatcagttattgatcgttgagccgccctacgatcccgaactggattttcattac
cgaattttcaatgcggatggcagcgaagtggcgcagtgtggtaatggcgctcgctgcttt
gcccgtttcgtacgcctgaaagggctgaccagcaagcgtgagatcaacgtcagtacgcat
aacggccgtatggtgttgtcggtgacggaagacgagctggtgcaggtgaacatgggcgaa
cccaacttcgagccgcagcaggtgccgttccgcgccgctaagccggaaaaaacgtatatt
ctgcgtgtcgccgagcacacggtgctgtgcggcgcggtgtcgatgggcaacccgcattgc
gtgatccaggtggataatgtggatactgcgccggtagagacgctcgggccgttgctggaa
agccacgaacgttttccggaacgcgccaatgtcggttttatgcaggtggttgaccccggc
cttatccggttgcgcgtgttcgagcgcggcgcgggcgaaacccaggcctgcggtagcggt
gcctgtggcgcggtggcggtggggattcagcaggggctgctggcggcggatgtcaaagtg
cagctgccgggcggcgaacttgagattcactgggacggtcccggtcacccgctgtttatg
accggcccggctacgcatgtttatgatggatttatgcatctatga
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