Dickeya solani IPO 2222: A4U42_07870
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Entry
A4U42_07870 CDS
T04410
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A4U42_07870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_07870
Enzymes [BR:
dso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4U42_07870
DNA repair and recombination proteins [BR:
dso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4U42_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
Zn_ribbon_6
Zn_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
ANE77742
LinkDB
All DBs
Position
1881285..1883483
Genome browser
AA seq
732 aa
AA seq
DB search
MPVIQVALPVPLTRTFDYRLPQGITPPVPGVRVSVPFGNRKMIGIVTALSASSELPLEQL
KPLHDVLDDASLFPDSLWRILLWAAEYYHYPLGEVLFHALPILLRQGKPAHSAPLWQWFA
TEQGRVTPLNALKRAPKQQQALAALLQGPLYRHQVAETELTEAALQALREKGLGELRALP
QQVRDWRNDFSLTGERLRLNTEQATAVGAIRGEDDHFAAWLLAGITGSGKTEVYLSVLEN
ILAQGKQALVLVPEIGLTPQTIARFRDRFNAPVEALHSGLNDGERLSVWLRARQGESAIV
IGTRSALFTPFARLGLIVIDEEHDGSYKQQEGWRYHARDLAVFRARQEDIPIVMGSATPA
LETLYNVQIGKYRQLRLSKRAGNARLAQQHLLDLKGLPLTTGLSQPLINRIRHHLAADNQ
VILFLNRRGFAPVVLCHECGWIAECQRCDSYYTLHQHQRMMRCHHCDSQRPIPQQCPQCG
STHLVPVGLGTEQLEQALPTLFPEAPITRIDRDTTSRKGALEQQLAQVRQGGARILIGTQ
MLAKGHHFPDVTLVALLDVDSSLFSADFRATERFAQLYTQVSGRAGRAGKAGEVVLQTHH
PEHPLLQTLLHQGYDAFASQTLKERQSVFLPPFTSHVLFRADDHDNQQASLFLQQLRNLL
EASPLRDDSLWLMGPVPALQPKRAGRFRWQLLLQHPSRATLQRLIRNSMPLIDTLPQTRK
VKWVMDVDPTDN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttattcaggttgccttaccggtaccgctgacgcgcacgtttgattaccggctg
ccgcaaggcataacgccgccggtaccgggcgtgcgggtcagcgttcccttcggcaaccgt
aaaatgatcggtatcgtcactgccctgagcgccagcagcgaactgccgctggaacagctt
aaaccactgcacgacgtgctcgatgacgcctcgctgtttccggacagcctgtggcgcatc
ctgctgtgggcggcagagtattaccattatccgcttggcgaagtgctgttccatgccctg
ccgattttgctccggcagggaaaacccgcccatagcgcgccactctggcaatggttcgcg
accgaacaagggcgcgtcacgccgctgaacgcgctgaaacgggcgcccaagcaacagcag
gcgctggcggcgctgctacaagggccgctgtaccgccatcaagtggcggaaaccgaactg
acggaagccgcgctgcaggcgctgcgcgaaaaaggactgggcgaactgcgcgcgctaccg
cagcaggtacgagactggcgcaacgattttagcctgacgggggagcgcctgcgtcttaat
accgaacaggccaccgccgtcggcgccatacgcggcgaagacgaccattttgccgcctgg
ctgctggcgggcattaccggctccggcaaaaccgaggtctacctcagcgtactggaaaat
attctggcgcaaggcaagcaggcgctggtgctggtgccggaaatcggcctgacgccgcaa
accatcgcccgcttccgcgatcggttcaacgcaccggtggaagcattgcattcggggctg
aacgacggcgagcgactgtcggtgtggctgcgcgccagacaaggtgaatcggccatcgtc
atcggcacccgttccgcgctgtttaccccttttgcccgactggggctaatcgtcatcgac
gaagaacacgacggctcttacaagcagcaggaaggctggcgttatcacgcccgcgacctg
gcggtgttccgcgcccggcaggaagacattcccatcgtcatggggtcggccacgccagcg
ctggaaacgctttataacgtgcagattggcaaataccgtcagttgcggctcagcaaacgc
gccggcaacgcccggctggcgcagcaacatttgctggacctgaaagggctgccgctgacc
accggtttatcgcagccgctgatcaaccgcatccgccatcatctggccgcagacaatcag
gtcattctgtttctcaaccgtcggggcttcgcaccggtggtgctgtgtcatgaatgcggc
tggatcgccgaatgccaacgctgcgacagctactacaccctgcaccaacatcaacggatg
atgcgttgccaccactgcgacagccagcgaccgataccgcaacaatgcccgcagtgcggt
tccacccatctggtgccggtcggcctgggcaccgaacagctggaacaggcgctgccgacg
ctgtttcccgaggccccaatcacccgtatcgatcgcgacaccaccagccgcaaaggagcg
ctggagcagcaactggcgcaggtccgccagggcggcgcccgcattctgatcggcacccag
atgctcgccaagggccaccactttcccgacgtcacactagtggcgttgctggatgtcgac
agctcgctgttttccgccgacttccgcgccaccgagcgtttcgcccagctctacacccag
gtgtccggacgcgccgggcgcgccggcaaggcgggggaagtggtgctgcaaacccatcac
ccggagcacccgctgttgcaaacgctgctgcaccagggctacgacgctttcgccagccag
acgctgaaagaacgccagagcgtgttcctgccgccatttaccagccatgtgctgttccgg
gccgatgaccacgacaatcagcaggccagcctgttcctccagcagttgcgcaatctgctg
gaggccagtccgctgcgcgacgattcgttgtggctgatgggaccagtgccagcgctgcaa
cccaagcgtgccgggcgttttcgctggcaattgctgctgcagcatccgtcgcgcgccacg
ctgcaacggctgatccgcaactccatgccgttgatcgataccctgccgcaaacgcgcaag
gtgaaatgggtgatggatgtcgacccgacggacaattga
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