Dickeya solani IPO 2222: A4U42_08850
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Entry
A4U42_08850 CDS
T04410
Name
(GenBank) pectate lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00040
Pentose and glucuronate interconversions
dso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A4U42_08850
Enzymes [BR:
dso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
A4U42_08850
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Motif
Other DBs
NCBI-ProteinID:
ANE75430
LinkDB
All DBs
Position
complement(2101843..2104047)
Genome browser
AA seq
734 aa
AA seq
DB search
MKYAASGLLSVALNSFLLLGSNTAFAATQDTAPIWHSIAFGQSTDVNFATNVLPDKVGVN
DVTINGKKLTANDKVDLSAPITIESRGGKIANTHDGLTFFYTQLPANVNFTLQSDVTVDQ
FGPESDAKPNAQEGAGLLVRDILGVPRQEPLKEGYEEFPAASNMVMNAIMTQDKKSKTDV
KMQLISRDGVTQPWGNTNAKITRTSYQEKINLEQTPTFRLKLERTDDGFITSYAPKGSDQ
WVSKTEKSADLVTRQDKDHYYVGFFASRNAKITISNASLTTSPANTKPSAPFKAETNAPL
LQVASSPLSASDTYQVQARVNYNGTIAVFQNGKSLGKPQQIRAGNYFSLTAKLTQPKSDF
KLVYVPGEGEDKTAKETSFSVEKIKLTDAKNLYVSPEGKADNNGSKNAPLDIKTAINALQ
AGGTLWLMDGDYSATVIPVSASGNANGIKTLMPTGKKAVFHGLQLNASYWKVKGVEITEK
SFRIEGSHNQIERVLAHHCDNTGIQVSSNDNVGRPLWASHNLILNSESHSNQDPSKKDAD
GFAVKMRVGEGNVIRGAFSHDNVDDGFDLFNKIEDGPNGVVVIENSISVNNTSNGFKLGG
EGQPVAHQVKNSIAIGNHMDGFSDNFNPGALQVSNNIALDNVRFNFIFRPSPYYGPEKQG
IFKNNVSLRTKPGKYDDAVVGRVDASNYFIKNNRALNSQGKEITTANYQSVTVPAVFSRD
EKGNLQLGDFLKKK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgctgcttcggggcttctctctgtcgccctaaattcttttttgcttctgggt
tccaataccgccttcgccgccactcaggataccgcgccaatctggcacagcatcgcgttc
ggccaatccacggatgtgaatttcgcgaccaacgttctgccggacaaggtgggcgtcaac
gatgtcaccatcaacggcaaaaagctgacggcaaatgacaaggtcgatctctccgcgccg
attactatcgaaagccggggaggaaaaatcgccaatacgcatgacggtttgaccttcttc
tacacccagttgcccgccaacgtgaatttcacgctgcaatccgacgtgacggtcgatcag
ttcggcccggaaagcgacgccaaacccaacgcacaggaaggtgccggtctgctggtgcgc
gatattctcggcgtaccgcgtcaggagccattgaaagaggggtacgaagagtttccggcg
gcatcgaacatggtgatgaacgccattatgacgcaggataagaaatcgaaaaccgacgtg
aagatgcagcttatcagccgcgatggcgttacgcagccttggggcaataccaacgcgaaa
ataacccgcaccagctatcaggaaaaaatcaatctggagcagacgccgaccttccgcctg
aaactggaacgcaccgacgacgggttcatcacctcgtatgctcctaaaggcagcgaccaa
tgggtgagcaagaccgaaaaaagcgcggatctcgttacccgtcaggacaaggatcactac
tatgtggggttcttcgcctcccgtaacgcgaagatcaccatcagcaacgccagtctgacc
accagcccggccaacaccaaaccttccgccccattcaaagcggaaaccaatgcgccgctg
ttgcaagtagcgtcttcaccgctctccgccagcgacacctatcaggtacaggcgcgggtc
aattacaacggcaccattgccgtgttccagaacggcaaatcgctcggtaaaccgcaacag
attcgcgccggaaattatttttcgcttaccgcgaagctgacgcagcccaaatcggatttc
aaactggtttacgtaccgggtgaaggcgaagacaaaacggcgaaagaaacctcgttcagc
gtggaaaaaatcaagctgaccgatgccaaaaatctgtacgtttctccggaaggcaaagcc
gacaacaacggcagcaagaatgcgccgctggatatcaaaacggccatcaacgccctgcag
gccggcggcacgctgtggctgatggacggcgattacagcgccactgtgattccggttagc
gccagcggtaacgccaacggtattaaaacgctgatgccgaccggcaaaaaagcggtattc
cacggcctgcagctcaacgccagctactggaaagtcaaaggggttgaaatcacggaaaaa
agtttccgtattgaaggcagccacaaccagattgaacgtgtgctggcacaccactgcgac
aacaccggtattcaggtttcttccaacgacaacgtgggtcgtccgctgtgggccagccat
aacctgattctgaactcggaatcacatagcaatcaggaccccagcaaaaaagatgcggat
ggcttcgccgtgaaaatgcgcgtcggcgaaggtaacgtgattcgcggcgcgttctcccac
gacaacgttgacgacggtttcgacctgttcaacaaaattgaagacggcccgaacggggtt
gtggttatcgagaactccatttcggtcaacaacaccagcaacggctttaaactggggggt
gaaggccagccagtggcccatcaggtgaaaaatagcatcgctatcggcaaccacatggac
gggttcagcgataacttcaacccaggcgcgctgcaagtctccaacaacatcgcgctggat
aacgttcgtttcaactttatcttccgcccaagcccttattatggtccggaaaaacaaggc
attttcaaaaacaacgtttcgctgcgtactaaacctggcaagtatgacgatgccgtggtg
ggccgggtggacgccagcaactacttcatcaagaataaccgtgcgctcaatagtcagggc
aaggagatcacgacggcgaattaccaatccgtcaccgtgccggcggtcttcagccgtgat
gaaaaaggcaatctgcaactgggcgattttctgaagaagaaataa
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