Dickeya solani IPO 2222: A4U42_09160
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Entry
A4U42_09160 CDS
T04410
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dso03016
]
A4U42_09160
Enzymes [BR:
dso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
A4U42_09160
Transfer RNA biogenesis [BR:
dso03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
A4U42_09160
Prokaryotic type
A4U42_09160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ANE75488
LinkDB
All DBs
Position
complement(2172305..2173219)
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AA seq
304 aa
AA seq
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MELIFLGTNAGVPTKERNVTSIALDLHGIRPAFWLFDCGEGTQHQILRTPVKPGKLEKIF
ITHLHGDHLFGLPGLLCSRSMAGIETPLTLYGPAGLKTFVETTLALSGSWLTYPLEVVEV
VPGTVCEDRQLRVTAHELSHTLYCVGYRIEERPKPGPLDVDKLAAEGIKPGAYFQQLKRG
ETVTLDDGRELNGWDYVGPGLPGKSLAIFGDTRPTPEALKLAAGVDVMVHEATLEGAMAE
RANERGHSTTLQTAAAARDAGAKRLIITHFSARYGQEDLERLRQECQTLFPATEVATDLA
TFRV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatttttctcggcaccaacgccggcgtgcccaccaaagagcgtaacgtcacc
agcatcgcgctcgatctgcacggcattcgcccggcgttctggctgtttgactgcggtgaa
ggcacccagcaccagattctgcgcaccccggtcaaacccggcaagctggagaagattttc
atcacccatttgcacggcgatcatctgttcgggctgcccggcctactttgctcgcgatcc
atggcgggcatcgaaacaccgctgacgctctacggcccggccgggctgaaaaccttcgtc
gaaaccacacttgcgctgagcggctcctggctcacttatccgctggaggtggtggaggtc
gttcccggtacggtgtgtgaggaccgtcagttgcgggtaacggcgcatgaactgtcgcac
accctgtattgcgtgggataccgcattgaagagcgccccaaaccgggtccgctggatgtg
gataaactggcggcggagggcatcaaacccggtgcctatttccagcagttaaaacgcggg
gaaacggtgacgctggacgacgggcgggagctgaacggctgggattacgtcggccccggc
ctgccgggcaagtcgctggcgatcttcggtgatacccgcccgacgccggaagcgctcaaa
ctggccgccggtgtcgatgtgatggtgcacgaagccacgctggaaggggcgatggcggag
cgcgccaacgaacgcgggcattccaccaccctgcaaaccgccgccgccgcgcgggacgcc
ggcgccaaacggttgatcatcacccatttcagcgcccgctacggtcaggaggacctggaa
cggctgcgtcaggaatgtcagacgctgttcccggctaccgaggtcgccaccgatctcgcc
accttccgggtatag
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