Dickeya solani IPO 2222: A4U42_11300
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Entry
A4U42_11300 CDS
T04410
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dso03000
]
A4U42_11300
Transcription factors [BR:
dso03000
]
Prokaryotic type
Helix-turn-helix
GntR family
A4U42_11300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_24
HTH_36
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
ANE75869
LinkDB
All DBs
Position
complement(2642730..2644214)
Genome browser
AA seq
494 aa
AA seq
DB search
MDFLTRPFSPRPSAPLNQQLYQRIRDAIATGQLHPGERVPSVRSLASELNLARGTVEAAY
QRLTSEGYLLPRGPAGTIVSPSLTNLTPGHAPAAPPPSRPQPEPQSPVILPFQLGLPALD
AFPRKTWNRLAGQRLRTLTGDALAYPDPQGYLPLRRAIAAYLGISRGIACSEQQVFITAG
YHCSLDLICRSLFTPGDLGWYEDPGYPFARRFLLHAGMQLAPVPVDEAGLDVAAGEQYAG
HAHFAVVTPTHQSPLGVALSLPRRLALLAWAARRGAWIIEDDYDSEFRYHGRPLPALKSL
DSDERVIYTGTFSKVFFPGLRLAYLVVPQTQIPTFQQTAQILHSNGFTLAQATAADFMER
GYFARHIRKMRALYAERRRYLQDALTTLAGDRLQLHASAGGMHLLARLPPGGSLDVDIAA
EAISAGLSIQALSQWRQRPDSAGGLLMGFTNLVSAEQAHQLTQRLCALPSFLRLPSADGN
NLTSPFSDAKSADR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggattttctgaccagaccgttctcgccacggccttcggcaccgctcaatcaacagctt
taccagcggattcgggatgcgatcgccaccgggcaattacaccccggcgagcgtgtaccc
tcagtacgcagtctggctagcgagctgaatctggcgcgcggcacggtggaagcggcctat
cagaggctgacaagcgaaggttatctgctaccccgagggccggccggtacgatcgtttca
cccagtctgaccaacctgacgccaggtcatgcgcccgccgccccgccgccatcacgcccg
caacccgaaccgcaaagcccggtgattctgccttttcagttgggattaccggctctggac
gcctttccgcgtaaaacctggaatcgactggctggacagcgcctgcgaacgctgaccggc
gatgcgctggcctaccctgacccacagggatacctcccgttacgccgcgctattgccgcc
tatctcggtatctcccgcggtatcgcctgctcagagcaacaggttttcatcaccgcaggc
taccactgctcgctggatttgatatgtcggtcgctgttcacacccggcgatctcgggtgg
tatgaagaccccggttatccgtttgcgcgtcggtttctgctgcacgccggtatgcaattg
gctccggtgccggtggatgaagcagggctcgatgtggcggcgggtgaacaatacgcaggg
cacgcccacttcgccgttgtgacgccgacccaccagagcccgcttggcgtagcgctatcg
ttgccgcgccgtctggcgttgctggcgtgggcggctcgccggggagcgtggattatcgaa
gatgattatgacagcgaattccgctatcacggccgaccgttaccagcgctaaaaagtctg
gatagcgacgagcgggttatttacaccggtacattcagtaaagtttttttccccggcttg
cgactggcctatctggtggtgccgcagacacagatcccgacatttcagcagacggcgcaa
atcctgcacagtaatggtttcacgctggcgcaagccaccgcggccgactttatggagcgg
ggatatttcgcccggcatatcagaaaaatgcgtgcgctctacgccgagcgccgccgttat
ctgcaggacgcactcaccacactggcaggagacagactacaacttcatgccagtgcgggc
ggaatgcatctgctggcccgcctgccgccgggaggctcgcttgatgtggatatcgcggca
gaagccatctccgccgggttatccattcaggcactgagccagtggcggcaacggccggac
agcgccggaggattactgatgggattcaccaatctggttagcgcggagcaagcgcatcaa
ctgacgcagcgcctctgcgcgttgccgtcgttcctgcgcctgccgagcgccgacggcaac
aacctgactagtccgttttcagacgcgaaatccgctgaccgctga
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