Dickeya solani IPO 2222: A4U42_12610
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Entry
A4U42_12610 CDS
T04410
Name
(GenBank) nucleoside-diphosphate sugar epimerase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00541
Biosynthesis of various nucleotide sugars
dso00552
Teichoic acid biosynthesis
dso01100
Metabolic pathways
dso01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
A4U42_12610
00552 Teichoic acid biosynthesis
A4U42_12610
Enzymes [BR:
dso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
A4U42_12610
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
NAD_binding_4
KR
CoA_binding
adh_short
TrkA_N
PglD_N
Ldh_1_N
NAD_binding_10
Methyltransf_14
DUF5832
DUF5480
Motif
Other DBs
NCBI-ProteinID:
ANE76098
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Position
complement(2914585..2916480)
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AA seq
631 aa
AA seq
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MFKPIPILLSAERRNKRIMTVLYDAIAIVASLYLAVAVRLGTLDFPVGYAEIASVLVTLS
ITLLVFVRCGMYRAVLRYMMLPAMGYVFLSVILSAISLALSSFFFQSFVPRSVPFIYAGL
ATLALGSPRVLIRTFYYHYYKRQKPNVFIYGAGATGRDLIYSLIQGDEFHPVVVLDDDEK
KIGQIICGIKVHHSSEFDKLKPLYQPVKLLLAINNIKKGQRLRLLEKLSHWPIEVQSVPS
VEDIAAGKATATEIRDLDVADLLGREAVGPDKQLMSKNITGKSVMVTGAGGSIGSELCRQ
ILTQHPRTLVLFELNEYNLYTIDQELQGIKKRLLLDTKIVATLGSVQKQNRVQKLIRAYQ
VETIYHAAAYKHVPLVEDNVIEGIRNNVFGTLACAEAAIEEGVRNFTLISTDKAVRPTNV
MGTSKRMAELILQALAERQNQTTFTMVRFGNVLGSSGSVVPLFKKQIRLGGPVTVTHPDI
TRYFMLIPEAAQLVIQAGAMGINGQVFVLDMGEPVKILDLARRMINLMGMKGYIEGYGDE
GDIVIKFTGLRPGEKLYEELLIGENVEGTSHPRIMTAQEERLSWQEMESLLQKLDKSCHD
YDVGDIKKILLEAPTGYTPITNNKEQQNQRV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacccattcccattttgctaagtgctgagcgtagaaacaaacgcatcatgacg
gtgctttatgatgccatcgccattgtggcttcactttatctggccgtcgccgttcgtctg
ggcacactggattttccggtaggttatgctgaaatcgccagcgtactggtcacgttatcc
atcaccctgctggtattcgttcgctgcggcatgtaccgggcggtgctgcgttacatgatg
ctgccggcaatggggtatgtttttctgtcggtgattctgtcggctatcagcctggcgctg
agtagcttcttttttcagtcgtttgtgccgcgcagcgtcccttttatctatgccgggctg
gcgacgctggcgctgggcagccctcgcgtgctcattcgcacgttttattaccactattac
aaacgtcagaagcccaatgtctttatctatggcgcgggagcaaccgggcgtgacttgatc
tattccctgatccagggagacgagtttcacccggtggtggtgcttgatgatgacgaaaaa
aagattggtcaaatcatctgtggcatcaaggtgcaccacagcagcgaattcgacaaactg
aaaccgttatatcaaccggtaaaactgctgctggcgattaataacatcaaaaaaggccag
cggttgagattgctggaaaaattgtcgcattggccgattgaagtgcaatccgtgccttcg
gtcgaagacattgccgccggaaaggcgactgcgacagaaatacgggatttggacgtggcg
gacttgctggggcgtgaagcggtaggccccgacaagcagctgatgtctaaaaacattacc
ggcaaatcggtcatggttaccggggcgggcggctcgattggttcagaactctgccgacag
attctgacgcagcatccccgcacgctggtgctgtttgaactgaatgaatacaacctctac
accatcgaccaggagcttcagggcatcaaaaaacggttgctgcttgataccaaaatcgtt
gccaccctgggatcggtgcaaaagcaaaaccgggtacagaaactgattcgggcctatcag
gtagaaaccatttatcacgccgcggcttacaagcatgtaccgttggtggaagacaatgtt
atcgaaggtatccgcaataatgttttcggcacgctggcctgtgccgaagcagcgatagag
gaaggggtgcgcaacttcaccctgatttcgacggacaaagcggtacgccccaccaatgtc
atggggaccagcaagcggatggccgaactgattctgcaagcgctggcggagcggcaaaac
cagacgaccttcactatggtccgtttcggcaacgtattaggttcatcaggctccgtcgtt
cctctgtttaaaaaacagattcgcctgggaggcccggttacggtaacccatccggacatt
acccgttacttcatgctgatacccgaagcggcgcaactcgttatacaggcaggcgccatg
gggattaacggacaggtttttgttctggatatgggggagccggttaaaatcctcgattta
gcgcgcagaatgatcaacctgatggggatgaaaggctacatcgaaggctatggtgacgag
ggcgatatcgttatcaaattcacgggattacgcccgggagagaagctctacgaggaattg
ttgattggcgaaaatgtggaaggcaccagccaccccagaatcatgaccgcgcaggaagaa
cgactaagctggcaggaaatggaatcgctattacaaaagctcgacaagagttgccatgat
tatgatgtcggcgacatcaagaagatcttgctggaagcgccaacgggatacacccccatc
acgaacaataaagagcagcagaatcaacgggtataa
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