Dickeya solani IPO 2222: A4U42_13110
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Entry
A4U42_13110 CDS
T04410
Name
(GenBank) type IV secretion protein Rhs
Organism
dso
Dickeya solani IPO 2222
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
PAAR_motif
Endonuclea_NS_2
TEN_YD-shell
RHS
NPP-6_helical
Motif
Other DBs
NCBI-ProteinID:
ANE76185
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All DBs
Position
complement(3027856..3032202)
Genome browser
AA seq
1448 aa
AA seq
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MLNDILSRVARVGAMHAGNRPNPPADRPQPCQGKPPTSPGKTIKHKSFKGAIVGAIAGAL
VAAAAFAVAAAVAGAIAVAVIGTGGMGAALVVGAVKLAVGFGAVSLLGGLIDTVSSKVSA
MVDSGSPSFGPVASGSGNVFVEKQPVARATQDTVACTRHNSPQLIAQGSESVFVNDAPAA
RIDDKTVCGATLKEGASTVFFGSGQGTYLEIAEEFTALQRALLIAVEFLVPPSRGMFKGL
GKLFTRGPMAVLRGMRAGAATTLRGLREAVSCASDGFRNSRGLSRVTEAVRGFLKDPVYI
ASGEVIESRTDIALGQTLPLVFERTYRSASVHVGLLGHGWHDNWSEVATVTRDGLNTHVV
ITLAQGYDIDFIFHQDVQAVYCPHYPEFTLHRRGDGFSLWHRDQQTWRDFSVIQGERRLL
SAIHDTHDNRIELVRDPKGYLRQVRHSDGVTLLLVWQGEYLHQIQRIDGGQKTLLAEYRQ
DEQGRLVEADATQAYHLYYEYDAVHRLTRWHDNDQTWARYEYDAQGRCVYTTCADGFLTA
RFDYLPDRVVMTDGLGQRSEFGFNDLHLMSWEKSPLGHVTRYEYDEVGNLLREISPAGRV
VEFTYLDDTGRVSTFTDASGHQWQYDYDAAERLCGVTDPLGREWGWVYDAEGNPKRLTGP
DASEVRFTWNRYGLLTQVSDAAGDTQARLQYDHRQRLLSATDAESRTQQLRYDRQDRVVQ
WQRADGARFRLGYRRASWTLPEQLIRPDDKEEQRQYDRHNNLLSYVDGNGALWRQTFGPF
DLLTARTDAEGRTWHYEYDKESQQLTTVIAPDGSRWQWWLDADGRVIRERDMAGTETHYD
YDEDGLCIRVHNGEGDTRHFLYDARGLLLRETAPDDTLHYRYDAVGRLTEVSSSTAHVQL
EYDLRDRVVREWHNGTLLTRQVDDNARTVTRTLTWDDDADDTTGTLAPLTSLFHYTRTGE
LRQVQLPDGAELTLTQDAAGRESLRTGGGFVQQREYDVMGWLTREMSGAQHDGRLQPAQT
REYRYDGAGNLTGVRHNRDAEGYRLDATGRVQEILSGGAGKPVDTTARYHYTRSGLPQEA
GRLTEWQSGRLVQRDDAHYQYDRAGRLIRKQVVQPGYRPQVWQYRWDSRNQLRVVDTPTG
ERWLYRYDPFGRRVGKRCDQKAEEIRYLWDGDQIAEIRHYRHGQLVARRHWVYNGWELVV
QQRQHTGGDWETDFVTSSQNGTPQALFAHDGTLRWQAPKATLWGRRQTEKSESPDPGLAF
AGQLRDSESGLCYNRFRYYDPAGGCYVSPDPIGIAGGESNYGYVSNPMCWVDPFGLAKCP
TLAHGANGEILSAKATVSKAELRTGSGTNQSSRDYARSLGNQTDDAGHILGNVLGGQGGK
GNVFPQLPAINRGQYRDFEKVVKDYIGQHGSVDIEWAFKYGNGGTRPTEIYYDVYQNGQK
VFGRIFNN
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgctcaacgatattctgagccgggtggcccgggtgggggccatgcacgccggaaaccgc
cccaatccgcccgccgaccggccacagccctgtcagggcaaaccgccgacctcgccgggc
aagaccatcaagcacaagagttttaaaggggccatcgtcggcgcgattgccggggcgctg
gtggcggccgccgcttttgccgtggccgcggcggtggcgggcgctatcgccgttgccgtg
atagggactggcgggatgggcgcggcgctggtggtgggggcggtaaaactggcggtcgga
tttggtgcggtcagcctgctgggcgggctgatagacacggtgtccagcaaggtgtcggcg
atggtggacagcggctcgccatcattcggaccggtggcgtcgggctccggcaacgtgttt
gtcgaaaaacagccggtggcccgcgccacccaggacaccgtggcctgcacccggcacaac
agcccgcaactgattgcccagggcagcgagtcggtgttcgtgaacgacgcgccagccgcc
cgtatcgacgataaaaccgtgtgtggcgccaccctcaaggaaggcgcctcgacggtattt
ttcggctccgggcagggcacctatctggagattgctgaagaatttaccgcactgcaacga
gcgctgctgattgcggtggagtttctggtgccgcccagccgcggcatgttcaaggggctg
gggaaactgttcacccgtgggccgatggcggtgctgcgggggatgcgcgcgggtgctgca
accacgctgagaggactgcgggaggcggtcagttgcgccagtgacggatttcgcaacagc
aggggactgtcgcgtgtcacggaagcggtgcgcggtttcctcaaagacccggtctatatc
gccagcggcgaggtgattgaatcccgtaccgatatcgcgctgggccagacgctgccgctg
gtgttcgagcggacctaccgctccgcctccgtgcatgtcgggctgctgggccacggctgg
cacgacaactggagcgaggtggcgacggtgacgcgcgacggcctcaacacccacgtggtc
atcacgctggcgcagggctacgacatcgatttcatcttccatcaggacgtgcaggcggtg
tactgcccgcactaccccgaatttaccctgcaccgccggggcgacggcttcagcctgtgg
caccgcgaccagcagacctggcgcgattttagcgtgatacagggcgagcgccggttgctg
tcggccattcacgatacccacgacaaccgcatcgaactggtgcgcgacccgaaaggctac
ctgcgccaggtgcgccacagcgacggcgtcaccctgctgctggtgtggcagggcgagtac
cttcaccagatacaacgcatcgatggcggccagaagacgttgctggccgagtaccgccag
gacgaacagggccgactggtggaagcggacgccacccaggcctatcacctctattacgag
tacgacgccgtccaccggctgacccgctggcacgacaacgaccagacctgggcgcgctac
gaatacgacgcgcaggggcgttgcgtctacaccacctgcgccgacggttttctgaccgcc
cgtttcgactacctgcccgaccgggtggtgatgaccgacggcctcggccagcgcagcgaa
ttcggcttcaacgacctgcatctgatgagctgggaaaaatccccgctcggccacgtcacc
cgctacgagtacgacgaggttggcaacctgctgcgggaaatctcgcccgccgggcgggtg
gtcgaattcacctatctggacgataccgggcgggtcagcacctttaccgacgccagcggc
catcagtggcagtacgactacgacgccgccgagcggctgtgcggcgtcaccgacccgctg
ggacgcgagtggggctgggtgtacgacgccgagggtaacccgaagcggctgaccggtccg
gatgccagcgaggtacgattcacctggaaccgctacggcctgctgacccaggtaagcgac
gccgccggtgacacgcaggcccggttgcagtacgaccaccgtcagcggctgctgagcgcc
actgacgccgagagccgtacccagcagttacgctacgacaggcaggaccgggtggtgcag
tggcaacgggcggacggtgcccgtttccggctcggctaccgccgggccagttggacgcta
ccggagcagttgatacgcccggatgacaaggaagagcagcgccagtacgaccgccataac
aacctgctgagctacgtggacggcaacggcgcgttgtggcgtcagaccttcgggccgttc
gacctgctgaccgcgcgcaccgacgccgaaggccgcacctggcactacgagtacgataaa
gagagccagcaactgacaacggttattgccccggacggcagccgctggcagtggtggctg
gacgccgacgggcgggtcatccgcgagcgcgacatggccggcaccgagacccactacgac
tacgatgaggacggcctgtgcatccgcgtgcacaacggcgaaggcgacacccgccacttt
ctgtacgacgcccgcgggctgctgctgcgtgaaaccgcaccggacgacaccctgcactac
cggtacgatgcggtgggccgcctgaccgaggtctcttcgtccaccgcccatgtgcagctg
gaatacgacctgcgcgaccgggtggtgcgcgaatggcacaacggcacgctgctcacccgc
caggttgatgacaacgcccgcaccgtcacccgcaccctgacctgggacgacgacgccgat
gacaccaccggcaccctcgcgccgctcaccagtctgttccattacacccgcaccggcgag
ctgcggcaggtgcagttgccggacggtgccgagctgaccctgacccaggacgcggcgggc
cgcgagtcgctccgcaccggcggcggctttgtgcagcagcgggaatacgacgtgatgggc
tggctgacgcgggaaatgagcggcgcacagcacgacggccgcctgcaaccagcgcagacg
cgggaataccgctacgacggtgccggcaacctgaccggggtacgtcacaaccgcgatgcc
gaaggttatcgtctggacgccaccggtcgggtgcaggaaatcctgagcggcggggcgggc
aaaccggtagacactaccgcccgttaccactacacccgcagcggcctgccgcaggaggca
ggacgcctcaccgagtggcagtctggcagactggttcagcgcgatgacgcccattaccag
tacgacagggccggacggcttatccgtaaacaggtggtacagccgggttaccgcccccag
gtatggcagtaccgctgggacagccgcaaccagctgcgggtggtggataccccgaccggc
gaacgctggctgtaccgttacgacccgttcggccgccgggtgggtaaacgctgcgaccag
aaagccgaagagattcgctacctgtgggacggagaccagatagcggaaatccgccactac
cgccacggccagctcgtggcccgtcgtcactgggtgtacaacggctgggagctggtggtg
cagcagcgccagcacaccggcggcgactgggaaacggattttgtgaccagcagccagaac
ggtaccccgcaagcactgttcgcgcacgacggcaccctgcgctggcaggcaccgaaggcc
acgctgtggggccggcggcagacagaaaaatcggaaagtccggacccgggtctggccttc
gccgggcagctccgtgacagcgaaagcgggctgtgctataaccgcttccggtactacgac
ccggccggcgggtgctatgtgtcgccggacccgatagggatagcggggggagagagtaac
tacgggtatgtctcaaatcccatgtgctgggtcgacccatttgggttggcgaagtgcccg
acgttagctcatggcgctaacggggaaatattatcagccaaagccaccgtatcgaaagcc
gagcttagaacgggttccggaacgaatcaaagctccagagattacgcccgttcattaggt
aatcaaaccgatgatgccggacacatattaggcaatgtgcttggtggtcaaggcggtaaa
gggaatgtgttcccgcagttgcctgctattaaccgcggacaatacagagactttgaaaag
gttgtgaaagattatatcgggcagcatggttcggttgatattgaatgggcctttaaatat
ggcaatggtggaacccgacctacagaaatctactatgacgtctatcaaaatggacagaaa
gtctttggtagaatattcaataactaa
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