Dickeya solani IPO 2222: A4U42_14315
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Entry
A4U42_14315 CDS
T04410
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_14315
DNA repair and recombination proteins [BR:
dso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4U42_14315
Archaeal homologous recombinant proteins
A4U42_14315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
AAA_21
DUF4404
NTPase_1
nSTAND3
zf-Mss51
AAA_22
SNF
Motif
Other DBs
NCBI-ProteinID:
ANE76403
LinkDB
All DBs
Position
complement(3313029..3316712)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTREPFASNSLFAITGPTGAGKTTLLDAICLALYHQTPR
LKVGPSQNELMTRHTAECLAEVEFEVKNVAYRAFWSQRRAHNSPEGNLQPPKVELALCAD
GKILTDKVNDKLTMIADITGLDFDRFTKSMMLSQGQFAAFLNADANQRAELLEELTGTDI
YGQISERVFEKHKDAQSKLETLRAQVATLELLSDEQRQALEQQLEAIRQQEQSLSLHREE
VLGHQRWYDTLLQHQQAQQQAQQQRAAQEQLQQQSQPQLDKLQRSEPAEKLRPRFDERER
ALREKQRLTQQLNSVRQQISRQQDALNLLKIQLEKALSTRQQHAEHRQQQETLINERILP
LDHHIATQQAQRAQQQQALDNLLEQQKTLIASLTRLQRQQEQTRQRLEDIENYRQQHSRH
QHLGSHIPLWQAQFPQQQKWQQDLQVLQEKAAQQQIQAEYLDQQRASLAEKHQAQQGACE
RAQQLLTEHLQQDEQLEAEQPLANLRQQLARLMAERPDRQQLATSAAVLQQLISQRTLLE
AQQLDTQRRIQALEDQQTQQRQDYQRQADHLTDLDKRHELELRIVSLERERQQLQPGKEC
PLCGSPHHPAVERYQALRPSETQLRLHALRQEVEALKASVVQTETQLQLQKQHRQQQQNA
LDGVRRDYESLQLQCQSVGKRLLVDFDPLQLPALHQWIEESNAQEQSLQAQIASRERNQR
HIQESKDLLTSAQQLLAQTVQQLELNTQQQASLHASREELRLLLEKTERELQRLRDSLSQ
TLETFELTAPTLAQQEDWLRQRQTEWLRWQENEHEQHQCQPQLAALEAEIIASQQRQEET
DAAIKTYQQQLADIQRTLEQAQQQRWQLMGNQAVNEVLKQLRQVSQTLELESQQAQQQWQ
QGQSLHSRLNGEIGSLEQQTQHADTALQQLQTGFAEELTAAGFNDEAAFRHALLAEAERH
QLLTLKERLSQRQQQVDALLQQADSALEQHMATRPESMPEGISDHDIRQLLSGLGDMVKA
EAAHQGELRQQLASDQQRRDKQRLLLEAIARGQQQCDDWGYLNQLIGSQKGDKFRRFAQG
LTLDHLVFLANRQLSRLHGRYLLQRKASDTLELQVADTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSTKTRIDSLFLDEGFGTLDGETLDTALDVLDNLNASGKSIGVISHVEAMK
DRIQVQIRVRKRNGLGVSQLDSAYAVK
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttagcctgcgcctgaaaaacctcaactcgctgcagggcgagtggaaaatc
gatttcacccgcgagccgttcgccagcaacagcctgttcgccatcaccggccccaccggc
gcaggtaaaaccacgctgctggacgccatctgcctcgcgctgtaccaccagacgccgcgc
ctgaaggtcggccccagccagaacgagctgatgacgcgccacaccgccgaatgtctggcg
gaagtggaattcgaggtgaagaacgtcgcctaccgcgccttctggagccagcgtcgcgcc
cataacagcccggaaggcaatctgcagccgcccaaggtggagctggcgttgtgcgccgac
ggcaaaatcctcaccgacaaggtgaacgacaagctgacgatgatcgccgatatcaccggg
ctggacttcgatcgtttcaccaaatcgatgatgctgtcccaggggcagttcgccgccttc
ctgaacgccgatgccaatcagcgggccgagctgctcgaagagctgaccggcaccgacatt
tacggccaaatctcggagcgggtattcgagaaacacaaagacgcccagagcaagctggaa
accctgcgggcgcaggtcgctacgctggaattgctgagcgacgaacagcgtcaggcgctg
gagcagcagttggaagccatccgccagcaggaacagtcgctgtcattgcaccgggaagag
gtgctggggcatcagcgctggtacgacacgctgttgcagcaccagcaggcgcaacagcag
gcccagcagcagcgcgccgcgcaggaacaattacagcaacaatcgcaaccgcagttggat
aaactgcagcgcagcgaaccggcggaaaaactgcgtccgcgcttcgatgaacgcgagcgc
gcgctacgggaaaaacagcgcctgacccagcagttgaatagcgtccgccagcagatcagc
cgccaacaggatgcgcttaatctgttgaaaatccagctggaaaaagcgttgtccacccgc
cagcagcacgccgagcatcgccagcaacaggaaacgttgatcaatgaacgtatcctgccg
ctcgaccatcacatcgccacccagcaggcccagcgcgcccagcaacagcaagcgctggat
aacctgcttgaacagcagaaaacgctgatcgccagcctgaccagactacagcgccagcag
gaacaaacgcggcaacggctggaagacatcgaaaactatcgccagcagcatagccgccac
cagcatttgggcagccatattccgctgtggcaggcgcaatttccccagcagcagaaatgg
cagcaggacttgcaggtgctgcaggaaaaagcggcgcagcagcagattcaggcggaatac
cttgaccagcagcgcgcctcgctcgcagaaaaacatcaggcgcagcaaggcgcctgcgag
cgagcccagcaactgctgaccgagcatctgcagcaggatgaacaactggaagcggagcaa
ccgctggcgaacctacgccagcaactggcccggcttatggccgaacggccggatcgccag
caactggccaccagcgccgccgtattgcagcagttgattagccagcgcaccctgctggaa
gcgcaacagctggatacccagcgccgtattcaggcgctggaagatcaacagacccagcag
cgtcaggactatcagcgccaggccgaccatctgaccgacctcgacaaacgtcacgaactg
gagctgcgtatcgtcagtctggagcgcgagcgccagcaactgcaaccgggcaaagagtgc
ccgctgtgcggctccccgcatcatccggcggtggaacgctatcaggcgctgcgcccttcg
gaaacccagctccggctgcatgcgctgcgtcaggaggtggaggcgctgaaagccagcgtg
gtgcagactgaaacccagcttcagttgcaaaaacagcaccgccagcagcagcaaaacgcg
ctcgacggcgtccggcgcgattacgagtcgctgcagttgcagtgccaatcagtcggtaaa
cgcttacttgttgacttcgatccgctgcaactgccggccctgcatcagtggattgaagag
tccaacgcacaggagcagtcgctgcaggcgcaaatcgccagtcgtgagcgtaatcagcgc
catattcaggaaagtaaggatttactcacctcggcgcagcaactgttggcgcaaaccgta
caacaactggagctgaacactcagcagcaggcgtcgctgcacgcctcgcgggaagaactg
cggctgttgctggaaaaaaccgaacgcgagttacaacgcctgcgcgacagcctcagtcag
acgctggaaacgttcgaactgacggcgcccacgctggcgcagcaggaagactggctgcgt
cagcgccagacggaatggctgcgctggcaggaaaacgaacacgaacagcatcagtgccag
ccgcaactcgccgcgctggaagcggaaatcatcgccagccagcagcggcaggaagaaacc
gacgccgccatcaaaacctatcagcagcaactggccgacatccaacgcacgctggaacag
gcgcagcaacagcgctggcaattgatgggcaatcaggcggtgaatgaggtgctgaagcaa
ttgcggcaggtcagccagacgctggagctggaaagccagcaggcgcagcagcagtggcaa
cagggccagtcgttgcacagccgcctgaacggggaaatcggcagtctggaacagcaaacc
cagcatgccgataccgcattgcagcagcttcagaccgggtttgcggaagaactgaccgcc
gccggattcaacgatgaagccgccttccgccatgccttgctggccgaggccgagcgccac
cagctcctcacgctaaaagagcggctcagccagcgtcagcagcaggtggacgcgttgttg
cagcaggcggacagcgcgctggagcaacacatggcgacccggccggaatcgatgccggaa
ggcatcagcgaccatgacatccgtcagttgctctccggactcggggacatggtaaaagcc
gaagccgcacatcagggcgaactgcgccagcagcttgccagcgatcagcaacgccgcgac
aaacagcgcctgttgctggaggcgatcgcccgcggtcagcaacagtgcgacgactggggc
tacctcaaccagttgattggctcgcagaaaggcgacaaattccgccgcttcgcgcaggga
ctgacgctggatcatctggtgtttctggccaaccgccaactgtcgcgcttgcatgggcgc
tacctgctgcaacgcaaggcatccgacacgctggaattgcaggtggccgatacctggcag
gccgacgcggtacgcgatacccgcacgctgtccggcggcgaaagttttctggtcagcctg
gcgctggcgctggcgctatccgatctggtcagcaccaaaacccgtatcgactcgctgttc
ctcgacgaaggttttggcacgctggacggcgagacgctggataccgcgctggacgtactg
gataacctgaatgcttccggcaagagcatcggcgtcatcagtcacgtggaagcgatgaaa
gaccgtattcaggtgcaaatccgggtcagaaagcgcaacggtctgggcgtcagccagctc
gacagcgcgtatgcggtgaaataa
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integrated database retrieval system
