Dickeya solani IPO 2222: A4U42_14320
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Entry
A4U42_14320 CDS
T04410
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_14320
DNA repair and recombination proteins [BR:
dso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4U42_14320
Archaeal homologous recombinant proteins
A4U42_14320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ANE76404
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All DBs
Position
complement(3316709..3317941)
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AA seq
410 aa
AA seq
DB search
MRIIHTSDWHLGQYFYTRSRAPEHQAFLHWLVQQVEQYQADAVIVAGDVFDNGAPPSYAR
EIYNHFVVALQRTGCQLVVMGGNHDSVATLNESRALLACLNTRVIAGFDGDIHEQVLVLN
NRAGEPGALLCAVPFLRPRDVLTSQAGQSGVQKQQALQDAITSHYQRCYQLACEQREALG
RELPIVLTGHLTTVGVATSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVAQCEH
IRYSGSPIPLSFDELNHEKSVYLVHFEQGKLQEVTALTVPTEQPMQLVKGNLPEIERRLA
GFRDYHGDKPVWLDIEIVTQDYLSDIQQHIQALTEPMNVEVLLLRRAREQQQQMLVQLEK
ETLEELQPAEVFARRLALESDLDEARQQRLKGLFDRVIQEIDEQRREASA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattattcacacgtctgactggcatctcggtcagtacttttatacccggagccgt
gcgcctgagcatcaggcgtttttgcactggctggttcagcaggttgagcagtatcaggcc
gatgcagtaatagtagcaggtgatgtgttcgacaacggcgcaccgcccagttatgcccgt
gaaatatataaccattttgtggtggcgttgcagcgcaccggctgccagttggtggtgatg
ggcggcaaccacgattcggtcgccaccctgaatgaatcacgcgcgctgctggcctgcctg
aatacccgggtgattgccggttttgacggcgatattcacgagcaagtgctggtgctgaac
aaccgcgcaggcgaacccggcgcgctgctgtgcgccgttccctttctgcgtccgcgcgac
gtgctcaccagccaggccggccagtccggcgtgcaaaaacagcaggcgttgcaggacgcc
atcaccagccattatcagcgctgttaccagctcgcctgcgagcagcgtgaggcgctgggc
cgcgaactgccgattgtgctgaccggccacctcactacggtgggcgtcgccacgtccgat
tcggtgcgcgatatctatatcggcacgctggacgcgttcccggcgcaggctttccccccg
gcggactacatcgcgctcggccacattcatcgcccgcagcgggtggcgcaatgcgaacac
atccgttacagcggctcgccgattccgctgagttttgacgaactgaatcatgagaaatcg
gtgtatctggtgcatttcgagcagggcaaactgcaggaggtcaccgcgctgaccgtgccg
accgaacaaccgatgcaactggtgaaaggcaatctgccggagatcgaacgccggctggcc
ggattccgcgactatcacggcgacaaaccggtgtggctggacattgagatcgtcactcag
gattatctgagcgacattcagcagcacattcaggcgctgaccgaaccgatgaatgtggaa
gtgctgttgctgcgccgggcgcgggaacagcagcaacaaatgctggtgcaactggaaaag
gaaacgctggaggagctgcaacccgccgaggtgtttgcccgacggctggcgctggagagc
gatctggacgaggcgcgccagcagcgcctgaaagggctgttcgaccgggtcattcaggaa
attgacgagcagcgacgggaggcgtccgcatga
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