Dickeya solani IPO 2222: A4U42_14785
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Entry
A4U42_14785 CDS
T04410
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dso03032
]
A4U42_14785
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_14785
Enzymes [BR:
dso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A4U42_14785
DNA replication proteins [BR:
dso03032
]
Prokaryotic type
DNA Topoisomerases
A4U42_14785
DNA repair and recombination proteins [BR:
dso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A4U42_14785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
ANE76489
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Position
3424656..3427289
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AA seq
877 aa
AA seq
DB search
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLSDLDKDTVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT
NIPPHNLSEVINGCLAYIDDENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKV
YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKLMTLKEILAAFVRHRRE
VVTRRTIFELRKARERAHILEGLAIALANIDPIIELIRHASTPADAKASLVAQAWALGGV
AAMLERAGDDAARPEWLEPEFGIHDGYYHLTELQAQAILDLRLQKLTGLEHEKLLDEYKE
LLAQIAELLFILSSPERLMEVIREELVAIREQYNDARRTEITHNSADINIEDLISQENVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIINLLPLEQNERITAILPVREYEEGMNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAEGKVVRFAESAVRTMGRTATG
VRGINLQNDDRVVSLIVPRGEGDILTVTQNGFGKRTAVTEYPVKSRATKGVISIKVSERN
GKVVGAVQVDSADQIMMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDEQVVGLQRVA
EPVEDDELDSVVPVDGELPEEDIDEPENDDDTSADDE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctagccagagaaattacaccggtcaacatcgaggaagagctgaaaagttca
tatctggattacgccatgtccgtcatcgtcgggcgtgcgttaccggacgttcgcgatggt
ctcaagccggtacaccgccgcgtgctgtacgcgatgagtgtgctgggtaacgactggaac
aagccttataaaaaatcggcccgtgtggtcggggacgttatcggtaaatatcacccgcat
ggtgatagcgcggtttacgacaccatcgtgcgtatggctcagccgttctcgctgcggtac
atgctggtggacggtcagggcaacttcggttccatcgacggcgactccgccgcggcgatg
cgttataccgaagtgcgcatgtcgaagatcgcccacgaactgctgtccgatctggataaa
gatacggtggattttgtgcctaactacgacggcacagaacagatcccggacgtgatgccc
acccgtatcccgaatctgctggtcaacggttcttccgggattgcagtggggatggcgacc
aacattccgccccataacctgtctgaagtgattaacggttgtctggcctacattgatgat
gaaaacatcagcgtcgaagggctgatgacgcatattccggggccggatttcccgaccgcc
gccatcatcaacggtaagcgcggtattgaagaagcctaccgcaccggccgcggcaaagtg
tatatccgcgcccgtgctgaagtagaagcggatgccaaatccggccgtgaaaccatcatc
gtgcatgaaatcccttatcaggtgaataaggcgcgactgattgaaaagatcgccgagctg
gtaaaagagaagcgcattgaaggcatcagcgcgctgcgcgatgagtctgacaaggacggc
atgcgcatcgtgattgaaatcaagcgcgatgcggtaggcgaggtggtgctcaaccatctg
tactcccagacccagatgcaggtgtcgttcggcatcaacatggtggcgctgcatcagggc
cagccgaagctgatgaccctcaaggaaattctggcggcgtttgtccgtcaccgccgtgaa
gtagtgacgcgccgcaccattttcgaactgcgcaaagcgcgcgagcgagcccacatcctg
gaagggctggcgattgcgctggctaatatcgacccgatcatcgaactgattcgtcatgct
tcgactccggccgacgccaaagcctcgctggtggcgcaggcgtgggcgctgggcggcgtg
gccgccatgctggagcgcgccggcgatgacgctgcgcgtccggaatggctggagccggag
ttcggcatccacgacggctactatcacctgaccgagttgcaggcgcaggcgattctggat
ctgcgtttgcagaaactgaccggtctggaacatgaaaaactgctggatgagtacaaggaa
ttgctggcgcagattgccgaattgctattcatcctgagcagtcctgaacgtctgatggaa
gtgatccgtgaagagctggtggcgattcgtgaacagtacaacgacgcgcgccgcaccgag
atcacccacaacagcgccgacatcaatattgaagatctgatctcccaagagaacgtggtg
gtgaccttgtcgcatcagggttacgtcaaatatcagccgctgagcgactatgaagcccag
cgtcgtggcggcaaaggcaaatcggccgcccgcatcaaggaagaggatttcatcgatcgg
ctgctggtggcgaatacccacgacaccatcctgtgcttctccagccgtggccgtctctac
tggatgaaggtttatcagctgccggaagcgagccgtggcgcccgcggtcgtccgatcatc
aacctgctgccgctggagcagaatgaacgcattaccgccattctaccggtacgcgagtac
gaagagggcatgaacgtgttcatggccacggctagcggcaccgtgaagaagaccgcactg
accgagtttagccgtccgcgcagcgccggtatcatcgccgttaatctcaacgaaggcgat
gagctgattggcgtcgacctgaccgacggcagcaacgaggtgatgctgttctccgccgag
ggcaaggtggtgcgtttcgccgaatcggctgtgcgtaccatgggacgtaccgctaccggg
gtgcgcggcatcaacctgcagaacgacgatcgggtggtgtcgctgattgtgccgcgcggc
gaaggcgatattctgactgtgacgcagaatggcttcggcaagcgtaccgccgtcaccgag
tatccggtgaaatcccgtgccaccaaaggcgttatttccatcaaggtgagcgagcgcaac
ggtaaagtggtcggcgcagtgcaggtcgattccgccgatcagatcatgatgatcaccgat
gccggtacgctggtgcgtactcgtgtatccgaggtcagcatcgtgggccgtaatactcag
ggcgtgacgctgatccgtaccgctgaggacgagcaagtggtcggcctgcagcgcgtggct
gaaccggtggaagacgatgaactcgacagcgtggtgccggttgacggcgaactgccggaa
gaggacatcgatgaaccggagaacgatgacgatacgtcggcagacgatgaataa
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