Dickeya solani IPO 2222: A4U42_16455
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Entry
A4U42_16455 CDS
T04410
Name
(GenBank) hypothetical protein
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dso03000
]
A4U42_16455
Transcription factors [BR:
dso03000
]
Prokaryotic type
Helix-turn-helix
Other families
A4U42_16455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
GAF_3
AAA_5
Mg_chelatase
AAA_2
AAA_16
HTH_8
AAA
AAA_19
AAA_7
AAA_3
PhoH
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ANE76786
LinkDB
All DBs
Position
3838965..3841142
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AA seq
725 aa
AA seq
DB search
MATRLTDTPSRLSILWQDALLKISQSLLQQRTIPDLLRALDGVSFSVVRFGRVNLILLDP
LHNQMNFYRHDRESGQTQCSEEAILLANGPGGVVWSTQTPLHCDRPHFQRDFPHLTDQPA
YAGLSDYCQLPLRGTHRGLGGVEFLKTDGSRFTDNELDFFQALAGVVALVVETIREREQV
LQEEERLRHERDHLRILVDVTNTVISKLELKALALEVSREIHRFFGIDFIALVLKEGEGE
AQRLKYLATVYPPAGAPKTAQGEVDRAQTLADGVMAQHQPQLVRVTERPQTGEPRPLSQW
FDNALSHVCLLPLAFGNRTLGVLELAHRSALAVSEADLRLLRQIAARIAIALDNALAYEQ
ITRLKDSLIHENFYLTEQLTEHIHQRSGDEFGEIIGRSAAIRQVLEQVEMVAASDSTVLI
LGETGTGKELIARAIHSLSQRKAQHMVKMNCAAIPSGLLESDLFGHEKGAFTGATSQRQG
RFELADSSTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKVIPVDVRLIAATNRDLKQ
MVADREYRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRTIDSIPSDMLR
QLSRLPWPGNVRELENVVERAVILTRGTTLNLQMDELQHHLSPLEVPKPAHRDLTPPPVA
AEPSSGQLDAEEESERERIIRVLRETNGIVAGPKGAAARLGLKRTTLLSRMQRMGISARE
IEGIS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacgactgacagacactccgtcccgactgtctattctgtggcaggatgccttg
ctgaaaatttctcagtcactgttgcaacaacgcaccattcctgacctgttgcgggcgctg
gatggcgtgtcgttttcggtggtgcgctttggccgggtcaacctgatcctgcttgatccg
ctgcataaccagatgaatttctatcgccacgaccgcgaatccgggcagacccagtgcagc
gaagaggcgattctgctggctaacgggcctggcggggtggtgtggagcacgcagaccccg
ctgcattgcgatcgtccacactttcagcgtgatttcccccacctgactgaccagccggcc
tacgccggcctgagtgattattgtcagttgccgctgcgtggcacgcaccgcgggttgggc
ggggtggagttcctcaagaccgacggtagccgtttcaccgataacgaactcgattttttc
caggcgctggccggggtggtagcgctggtggtggaaaccattcgcgagcgcgaacaggtg
ctgcaggaagaggagcggttgcgccatgagcgcgaccatctgcgcattctggtggatgtc
actaacaccgtgatttccaaactggaactgaaggcgctggcgctggaagtgtcgcgcgaa
atccaccgctttttcggcatcgattttatcgcgctggtattaaaagaaggcgagggcgaa
gcgcaaaggctcaagtatctcgccaccgtttacccgccggccggcgcgccgaaaacggcg
caaggcgaggtggatcgggcgcaaacgctggcagacggcgtgatggcgcagcatcagccg
cagttggtacgggtgacggaacgcccccaaaccggcgaaccgcgcccgctcagccagtgg
ttcgacaatgcgttgtctcacgtctgcctgctgccgctggcgtttggcaaccggacgctg
ggcgtgttggagctggcgcaccgctcagcgctggcggtcagcgaggcggatctccggctg
ctgcggcagattgccgcgcgtatcgccattgcgctggataacgcgctggcctatgagcag
atcacccggctgaaggattcgctgatccatgaaaacttctaccttaccgaacagcttacc
gagcatatccatcagcgcagcggcgatgagtttggcgaaatcatcggccgcagtgcggcg
atccgccaggtgctggaacaggtagagatggtggcggccagcgacagcaccgtgctgatt
ctgggggaaaccggcaccggcaaggaactgattgcccgcgctatccatagcctgagccag
cgtaaagcccagcatatggtgaaaatgaattgcgccgccattccgtccggcctgctggaa
agcgacctgttcggccatgaaaagggcgcgtttaccggcgccaccagccagcgtcagggg
cggtttgaactggcggatagcagtacgttgtttctggatgaggtgggcgatatcccgctg
gaattgcagcccaaactgctgcgggtgctgcaggagcgggagatcgagcggctgggcggc
agcaaggtgattccggtggatgtgcggttgatcgccgccaccaaccgcgacctgaagcag
atggtggcggaccgcgagtaccgcagtgacctttattaccggctcaatgtctttcccatc
gtcattccgccgttgcgcgagcggccggaagatattccactgctggtgaagtttttcacc
cgcaagattgcccgtcgtatgaaccgtaccatcgacagcattccgtccgacatgttgcgt
cagctgagccgtttgccgtggcccggcaacgtgagggagttggaaaacgtggtagagcgc
gcggtgatcctgacgcgcggcaccacgctcaatctgcaaatggatgaattgcagcatcac
ctgtcgccgctggaggtgcccaaacctgcgcaccgcgaccttacgccgccgccggtggcg
gccgagccgtcatccgggcaactggatgctgaagaggaatcggagcgcgagcgtattatc
cgggtactgagggaaaccaacggtatcgtcgccggcccgaaaggcgccgccgcccggctc
gggcttaaacgcaccacgctgttgtcgcgcatgcaacgcatggggatttccgcccgggaa
atcgagggaatttcctga
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