KEGG   Dickeya solani IPO 2222: A4U42_16455
Entry
A4U42_16455       CDS       T04410                                 
Name
(GenBank) hypothetical protein
  KO
K15836  formate hydrogenlyase transcriptional activator
Organism
dso  Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:dso00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dso03000]
    A4U42_16455
Transcription factors [BR:dso03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    A4U42_16455
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 GAF_2 GAF GAF_3 AAA_5 Mg_chelatase AAA_2 AAA_16 HTH_8 AAA AAA_19 AAA_7 AAA_3 PhoH HTH_50
Other DBs
NCBI-ProteinID: ANE76786
LinkDB
Position
3838965..3841142
AA seq 725 aa
MATRLTDTPSRLSILWQDALLKISQSLLQQRTIPDLLRALDGVSFSVVRFGRVNLILLDP
LHNQMNFYRHDRESGQTQCSEEAILLANGPGGVVWSTQTPLHCDRPHFQRDFPHLTDQPA
YAGLSDYCQLPLRGTHRGLGGVEFLKTDGSRFTDNELDFFQALAGVVALVVETIREREQV
LQEEERLRHERDHLRILVDVTNTVISKLELKALALEVSREIHRFFGIDFIALVLKEGEGE
AQRLKYLATVYPPAGAPKTAQGEVDRAQTLADGVMAQHQPQLVRVTERPQTGEPRPLSQW
FDNALSHVCLLPLAFGNRTLGVLELAHRSALAVSEADLRLLRQIAARIAIALDNALAYEQ
ITRLKDSLIHENFYLTEQLTEHIHQRSGDEFGEIIGRSAAIRQVLEQVEMVAASDSTVLI
LGETGTGKELIARAIHSLSQRKAQHMVKMNCAAIPSGLLESDLFGHEKGAFTGATSQRQG
RFELADSSTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKVIPVDVRLIAATNRDLKQ
MVADREYRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTRKIARRMNRTIDSIPSDMLR
QLSRLPWPGNVRELENVVERAVILTRGTTLNLQMDELQHHLSPLEVPKPAHRDLTPPPVA
AEPSSGQLDAEEESERERIIRVLRETNGIVAGPKGAAARLGLKRTTLLSRMQRMGISARE
IEGIS
NT seq 2178 nt   +upstreamnt  +downstreamnt
atggcgacacgactgacagacactccgtcccgactgtctattctgtggcaggatgccttg
ctgaaaatttctcagtcactgttgcaacaacgcaccattcctgacctgttgcgggcgctg
gatggcgtgtcgttttcggtggtgcgctttggccgggtcaacctgatcctgcttgatccg
ctgcataaccagatgaatttctatcgccacgaccgcgaatccgggcagacccagtgcagc
gaagaggcgattctgctggctaacgggcctggcggggtggtgtggagcacgcagaccccg
ctgcattgcgatcgtccacactttcagcgtgatttcccccacctgactgaccagccggcc
tacgccggcctgagtgattattgtcagttgccgctgcgtggcacgcaccgcgggttgggc
ggggtggagttcctcaagaccgacggtagccgtttcaccgataacgaactcgattttttc
caggcgctggccggggtggtagcgctggtggtggaaaccattcgcgagcgcgaacaggtg
ctgcaggaagaggagcggttgcgccatgagcgcgaccatctgcgcattctggtggatgtc
actaacaccgtgatttccaaactggaactgaaggcgctggcgctggaagtgtcgcgcgaa
atccaccgctttttcggcatcgattttatcgcgctggtattaaaagaaggcgagggcgaa
gcgcaaaggctcaagtatctcgccaccgtttacccgccggccggcgcgccgaaaacggcg
caaggcgaggtggatcgggcgcaaacgctggcagacggcgtgatggcgcagcatcagccg
cagttggtacgggtgacggaacgcccccaaaccggcgaaccgcgcccgctcagccagtgg
ttcgacaatgcgttgtctcacgtctgcctgctgccgctggcgtttggcaaccggacgctg
ggcgtgttggagctggcgcaccgctcagcgctggcggtcagcgaggcggatctccggctg
ctgcggcagattgccgcgcgtatcgccattgcgctggataacgcgctggcctatgagcag
atcacccggctgaaggattcgctgatccatgaaaacttctaccttaccgaacagcttacc
gagcatatccatcagcgcagcggcgatgagtttggcgaaatcatcggccgcagtgcggcg
atccgccaggtgctggaacaggtagagatggtggcggccagcgacagcaccgtgctgatt
ctgggggaaaccggcaccggcaaggaactgattgcccgcgctatccatagcctgagccag
cgtaaagcccagcatatggtgaaaatgaattgcgccgccattccgtccggcctgctggaa
agcgacctgttcggccatgaaaagggcgcgtttaccggcgccaccagccagcgtcagggg
cggtttgaactggcggatagcagtacgttgtttctggatgaggtgggcgatatcccgctg
gaattgcagcccaaactgctgcgggtgctgcaggagcgggagatcgagcggctgggcggc
agcaaggtgattccggtggatgtgcggttgatcgccgccaccaaccgcgacctgaagcag
atggtggcggaccgcgagtaccgcagtgacctttattaccggctcaatgtctttcccatc
gtcattccgccgttgcgcgagcggccggaagatattccactgctggtgaagtttttcacc
cgcaagattgcccgtcgtatgaaccgtaccatcgacagcattccgtccgacatgttgcgt
cagctgagccgtttgccgtggcccggcaacgtgagggagttggaaaacgtggtagagcgc
gcggtgatcctgacgcgcggcaccacgctcaatctgcaaatggatgaattgcagcatcac
ctgtcgccgctggaggtgcccaaacctgcgcaccgcgaccttacgccgccgccggtggcg
gccgagccgtcatccgggcaactggatgctgaagaggaatcggagcgcgagcgtattatc
cgggtactgagggaaaccaacggtatcgtcgccggcccgaaaggcgccgccgcccggctc
gggcttaaacgcaccacgctgttgtcgcgcatgcaacgcatggggatttccgcccgggaa
atcgagggaatttcctga

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