Dickeya solani IPO 2222: A4U42_16805
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Entry
A4U42_16805 CDS
T04410
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00300
Lysine biosynthesis
dso00470
D-Amino acid metabolism
dso01100
Metabolic pathways
dso01110
Biosynthesis of secondary metabolites
dso01120
Microbial metabolism in diverse environments
dso01230
Biosynthesis of amino acids
Module
dso_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A4U42_16805
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A4U42_16805
Enzymes [BR:
dso01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
A4U42_16805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1583
Motif
Other DBs
NCBI-ProteinID:
ANE76847
LinkDB
All DBs
Position
3915586..3916857
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AA seq
423 aa
AA seq
DB search
MAKLPQHVHDVIVRLQQQHTDPLAAFVYDLTALRQHVGEVMAALPPGVELYYAIKANSEK
PILDALAPLVHGFEISSGGEIARVAGCDTRKPFVFSGPGKLDSDFDLALEQGVEAVHVES
RHEIARLQQRAKQHGVVQPVFIRINPELASSLTSKLAMAGTPTPFGMDEADLADAVREVD
NASHLQLKGFHVHAMSHQMVVARHQQLLDLYLTRWPQWRALSAHPQHITHLNVGGGIGVP
YLTPERFDWPALCDYLRTRLAQQPDAPIVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFL
VCRGGTHQFRLPVAQGHDHPVIHLPLASAPTTGETRDWTVVGQLCTPKDVLSRDQRLTDV
NIGDLLVLPLAGAYGYNISHADFLCHPRPGQYFITDEGLITDALFTTDDGMTADVAGAVS
RVE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctaagctgcctcagcacgttcacgatgtgattgtccgcctgcaacagcagcatacc
gacccgctggcggcgtttgtgtacgacctgacggcgctgcgccagcacgtcggcgaggtg
atggcggcgctgccgccgggcgtcgaactctattacgccatcaaagccaacagtgaaaaa
ccgattctggacgcgctcgcgccgttggtgcacggttttgaaatctcgtcgggcggtgaa
atcgcgcgcgtggccggttgcgacacacgcaaacccttcgtgttctccgggccgggaaag
ctggactctgacttcgacctggcgctggaacagggcgtggaagcggtacatgttgagagt
cgccacgagattgcgcgcctgcaacagcgggcgaagcagcacggcgtggtccagccggtg
ttcatccgcatcaatccggaactggcgtcgtcgctgaccagcaagctggcgatggccgga
acgccgacgccgttcggcatggatgaagccgacctggcggatgcggtgcgggaggtggat
aacgccagccatctgcaactgaaaggatttcatgtccacgccatgtcgcaccagatggtg
gtggcgcggcaccagcaactgctggatctctacctgacgcgctggccgcagtggagagcg
ctgtccgcgcatccgcagcatatcacccacctgaacgtgggcggcggcatcggcgtgccg
tacctgacgccggagcgtttcgactggccggcgctgtgcgattacctgcgcacgcggctg
gcgcaacagccggacgcgccgattgtccgttttgaaccggggcgtttcatcagcgcctac
tgcggttattacgccatcgaggtgctggataaaaagcgcagccacggcaaacattttctg
gtttgtcgcggcggcacccatcagttccgcctgccggtagcgcaggggcacgatcatccg
gtgatccacctgccgctggcgtcggcgccgacaaccggcgagacgcgcgactggacggtg
gtcggccagctgtgcacgccgaaagatgtgctcagccgcgaccagcgcctgaccgacgtc
aatatcggtgatctgctggtattgccgctggcgggcgcctacggctacaacatttctcat
gccgacttcctgtgtcatccgcgtcccggtcagtatttcatcactgatgagggtcttatt
actgacgcgcttttcactactgacgacggcatgacggcggatgtggccggagcggtgagc
cgtgtggaataa
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