Dickeya solani IPO 2222: A4U42_17160
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Entry
A4U42_17160 CDS
T04410
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dso03000
]
A4U42_17160
Transcription factors [BR:
dso03000
]
Prokaryotic type
Helix-turn-helix
LysR family
A4U42_17160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_8
DUF2209
Motif
Other DBs
NCBI-ProteinID:
ANE76910
LinkDB
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Position
complement(4004932..4005864)
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AA seq
310 aa
AA seq
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MLKDGDITFRKLEIFKTFMETGNITRTAELLGLSGVSVHRALHTLEEGVRCPLFIHKGRN
LVALPAAHTLLEYSQEAMLLMERGLEETRKTAGVGQGRLRIGTLYSLTLETVPRLIMGVK
LRRPDLELDLTMGSNQRLLAMLDDQQLDAVLISLSDNTIDRNQLEFLPLFEDDICLAAPA
AAKLDTRQPADLRDFHHQRFVSLSEGFATYAGFQEAFHIAGFEPEIVTRVDDIFSMLSLV
QAGVGFTLIPERMKKVYENDVQLLKLAPPYQMRQLIAIVFARNREHDPNLLALVAEGRMY
ARSLNATPAP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaagacggcgacatcacgttccgcaagcttgagattttcaaaacgttcatggag
accgggaatatcacccgcaccgccgaactcctcgggctcagcggcgtcagcgtacaccgt
gcgttgcatacgctggaggaaggagtgcgctgcccgttgtttatccataaagggcgcaat
ctggtggcgctgccggcggcgcatacgctgctggaatacagccaggaggcgatgctgttg
atggagcggggactggaagaaacccgcaagaccgccggggtcggtcaggggcgattgcgc
atcggaacgctgtattcgctgacgctggaaacggtgccgcgcctgattatgggcgtcaaa
ctgcgtcgcccggatctggagctggatttaaccatggggtcgaatcagcgcctgctcgcc
atgctggacgatcagcaactggacgcggtcctcatctcgctttccgacaacactatcgac
cgtaaccagctggaattcctgccgctgtttgaggatgacatttgtctggcggcgccggct
gccgcgaagctggatacccgccagccggccgacctgcgcgacttccaccaccagcggttc
gtgtcgctgtccgaagggttcgctacctatgccggttttcaggaagcgtttcacatcgcc
gggttcgagccggaaatcgtcacgcgggtggacgacattttctccatgctgagtctggtg
caggccggcgtcggttttaccctcatccccgagcggatgaaaaaagtgtacgagaacgat
gtgcagttactgaaactggcgccgccttatcagatgcgccagctcatcgccattgtgttc
gcccgcaaccgcgagcatgacccgaatctgctggcgttggtggcggaaggccgcatgtac
gcccgcagcctgaacgctacgcctgcgccctga
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