Dickeya solani IPO 2222: A4U42_18195
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Entry
A4U42_18195 CDS
T04410
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4U42_18195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_18195
Enzymes [BR:
dso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
A4U42_18195
DNA repair and recombination proteins [BR:
dso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A4U42_18195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ANE77096
LinkDB
All DBs
Position
complement(4233335..4234192)
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AA seq
285 aa
AA seq
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MKYVGAHVSASGGVDQAVARAHDIGATAFALFTKNQRQWQAPPLAADVIDRFRAACAQYQ
FTPAQILPHDSYLINLGHPDDDALQKSQAAFIDEISRCQQLGLTLLNFHPGSHLRQIDES
TCLSRIARSINLALDATAGVTAVIENTAGQGSNLGFRFEHLAEIIDQVEDKSRVGFCIDT
CHAFAGGYDLRTEADCELAFAELERVVGFRYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDPRFDGIPLILETINPNIWAQEIAWLKSQQSPASVT
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatgtcggagcccacgtcagcgcctcgggcggcgtggatcaggcggttgcccgc
gcccatgacatcggtgccaccgcgttcgcgctgtttaccaaaaatcagcgccagtggcag
gccccgccgttggcggcggatgtcatcgatcgtttccgggccgcctgtgcgcagtatcag
ttcaccccggcccaaattctgccgcacgacagctacctgatcaatctggggcacccggac
gacgacgccttacagaaatcccaggcggcgtttatcgatgaaatatcgcgctgtcagcaa
ctggggctcacgttgctgaatttccatcccggcagtcacctgcgtcagatcgacgaaagt
acctgtctgagccgcatcgcccggtctatcaacctggcgctggacgccaccgccggcgtg
accgccgtgattgaaaataccgccggtcagggcagcaatctggggttccgctttgaacat
ctggcggaaatcatcgatcaggtggaagacaaaagtcgggtcggcttctgtatcgacacc
tgccacgcctttgccggcggttatgatctgcgcaccgaagccgattgcgagctcgctttt
gccgaactggaacgcgtagtcggtttccgctatttgcgcggtatgcacctgaatgacgcc
aaaagcgaattcaacagccgggtagaccgtcaccacagcctgggagaaggcaacatcggt
aaaaccgtattcagctatattatgcgcgacccgcgctttgacggtattccgctgattctg
gaaaccatcaacccgaatatctgggcgcaggaaatcgcctggctgaagtcacagcaatcg
cccgccagcgtcacctga
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