Dickeya solani IPO 2222: A4U42_19250
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Entry
A4U42_19250 CDS
T04410
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4U42_19250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dso03400
]
A4U42_19250
Enzymes [BR:
dso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
A4U42_19250
DNA repair and recombination proteins [BR:
dso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A4U42_19250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ANE77294
LinkDB
All DBs
Position
complement(4476663..4477469)
Genome browser
AA seq
268 aa
AA seq
DB search
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLDEVKQFGYHVFYHGQK
GHYGVALLTKAEPLAVRRGFPTDEEDAQRRIIMADLATPLGTLTVVNGYFPQGESRDHAV
KFPAKTRFYQDLQHYLEQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFL
PEEREWMERLKNWGLVDTFRAANPECQDRFSWFDYRSAGFDDNRGLRIDLIMATAPLASR
CAATGIDYAIRGMEKPSDHAPVWAEFTL
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgtttctttcaatatcaacgggctgcgcgcccgaccacaccagttggccgca
atcatcgaacaacatcagcctgatgtgatcggtctgcaggaaactaaagtccatgacgat
atgtttccgctcgacgaggtgaaacaatttggctatcacgtcttctaccacggacagaaa
ggccattacggcgttgcgctgctgaccaaagccgagccgctggcggttcggcgcggattc
cccactgacgaagaagacgcccagcgccgtatcatcatggcggacctggcgacgccgctc
ggtacgctgaccgtggtcaacggctattttccgcaaggcgaaagccgcgaccacgcggtg
aaattcccggccaagacccgtttctatcaggatttgcagcattatcttgaacagcaccat
caggcggaccagcccgtgctgattatgggtgacatgaacatcagcccgaccgatctggat
atcggtattggcgaggacaatcgtaagcgctggctgcgcaccggcaaatgctcatttctg
ccggaagaacgtgaatggatggaacggctgaagaactggggactggtcgataccttccgc
gccgccaaccccgagtgtcaggaccggttttcgtggtttgattaccgttcggccgggttt
gacgacaaccgcggcctgcgcatcgacctgattatggccaccgcaccactggccagccgc
tgcgcggccaccggcattgattatgctatccgcggaatggagaaaccttccgaccatgcc
ccggtatgggcggaattcacactctga
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