Dickeya solani IPO 2222: A4U42_19805
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Entry
A4U42_19805 CDS
T04410
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dso
Dickeya solani IPO 2222
Pathway
dso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4U42_19805
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dso02000
]
A4U42_19805
Transporters [BR:
dso02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A4U42_19805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_11
Lipoprotein_10
SBP_bac_6
DUF6200
PepSY_2
Motif
Other DBs
NCBI-ProteinID:
ANE77908
LinkDB
All DBs
Position
complement(4603925..4605037)
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AA seq
370 aa
AA seq
DB search
MGRLAALPVLLLPLLQAQAQTQTPDLSTMSWQAVEAQARQEGQLTWFNWYYQDRLREEVK
AFEKQYGIRVTIPDGEAMASINKLLAEQHREQGDIDVISVGGSQFGLFNGPKLFWGPLTS
RLPAGDKLTYQIEGVDTQGYAVAFWGNQTVIAYNSARIAAADLPHSLPQFEQFLVKNPGE
FTFNVENGGSGPAFIESVTRALVTDVNYRDGNAAPAVLQQLAPSWRWFNRYKSSLVISAS
NADSITRLNAGEFKLAASWEDLVLSLQRKGEVSPDIKFYLPDFGMPGGGNVVGIPANAKH
KAAALLFIHWLTQPDTQLRFHSQFGTALLKPAGDGGQAADSLDRSRSFAWAAKPLGDEIK
KQFIQNVMLK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atagggcggctggcggcgctaccggtgttgctgctgccgttactgcaggcgcaggcgcag
acccagacgccggatctgtccacgatgtcctggcaggcggtggaagcgcaggcacgccag
gaaggtcagcttacctggttcaactggtactatcaggaccggctgcgcgaagaggtgaaa
gcgttcgagaaacagtacggcattcgggtcaccattccggatggcgaagcgatggccagc
atcaacaagctgctggcggagcagcaccgcgagcaaggcgacatcgacgtgatctcggtg
ggcggcagccagttcgggctgtttaatgggcccaaactgttctgggggccgctcacttcg
cggttgccggccggcgacaagctgacctaccagatcgaaggggtcgatacacagggctac
gcggtggcgttctggggcaatcagaccgtgatcgcctacaactcggcccgcatcgccgcc
gccgatctaccgcattcgctgccgcagttcgaacaatttctggtgaaaaaccccggcgaa
ttcacctttaacgtagagaatggcggctccggtccggcgttcatcgaatccgtcacccgg
gcgttggtcaccgacgtgaattaccgcgacggcaatgccgcgccggcggtgttgcagcag
cttgcgccgtcctggcgctggttcaaccgttacaaaagcagcctggtgatcagcgcgtcc
aatgccgacagcatcacccgactgaacgccggcgaatttaagctcgccgcctcatgggag
gatttggtgctgtcgctgcaacgcaaaggcgaggtgtcgccggatatcaagttctacctt
cctgattttggcatgccgggtggcggcaatgtagtgggaatcccggccaacgccaaacac
aaggcggcggcgttactgttcatccactggctgacgcagccggacacgcaactgcgcttt
cactcgcagttcggcacggcgctgttgaagccggccggcgatggcggtcaagcggcggat
tcgctggatcggtcgcgcagtttcgcctgggcggccaaaccgctgggcgacgaaatcaaa
aagcagtttattcaaaacgtgatgctgaaatga
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