Dickeya solani IPO 2222: A4U42_20030
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Entry
A4U42_20030 CDS
T04410
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
dso
Dickeya solani IPO 2222
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dso03009
]
A4U42_20030
Enzymes [BR:
dso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A4U42_20030
Ribosome biogenesis [BR:
dso03009
]
Prokaryotic type
rRNA helicases
A4U42_20030
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Helicase_C_2
YlmH_RBD
Motif
Other DBs
NCBI-ProteinID:
ANE77433
LinkDB
All DBs
Position
complement(4662536..4663909)
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AA seq
457 aa
AA seq
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MTSFAELNALPAEQLTTLNELGYLSMTPIQAAALPAILAGKDVRAQAKTGSGKTAAFGLG
LLQHLDAGQFNTQSLVLCPTRELADQVANELRRLARYMPNIKVLTLCGGVPFGIQRDSLI
HAPHIIVATPGRLLDHLKKETVSVDALQTLVLDEADRMLDMGFADAINEVIAHVPAQRQT
LLFSATWPDAIAAISHRIQRDPLTIAIDTVDELPAVEQQFYEVSRSGKIDLLQKLLSREQ
PASCVVFCNTKKDCQAVYDALTDSNQSVLALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKALEMVINYELSWDPEVHVHRIGRTARAGESGLAISLCAPEEAQRANALEEML
NIKLNWHPLPTGLRITPLEATMATLCIDGGKKAKMRPGDILGALTGDMGLDGADIGKIAI
HPMHAYVAVKQSVARHAWKQLQQGKIKGKAVKVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcatttgctgaacttaacgcgcttcctgcggaacaactcactacccttaacgag
ctgggctacctgtccatgacccccattcaggcagcggcgttaccggcgatcctcgcagga
aaagacgtccgcgcgcaggcgaaaaccggcagcggcaaaaccgcggctttcggcctgggc
ctgttacagcaccttgatgccgggcagttcaacacccagtcgctggtgttgtgtccgacc
cgcgaactcgccgatcaggtagcaaacgaactgcgtcgtctggctcgctacatgccgaac
atcaaggtgctgactctctgcggcggcgtaccgttcggtatccagcgcgactcgctgatc
catgccccccatatcatcgtcgccacgccgggtcgactgctggatcacctgaaaaaagag
acggtaagcgttgatgcattgcagactctggtgctggatgaagcggaccggatgcttgat
atgggctttgccgacgccatcaacgaggttatcgcccacgtacccgcccagcgtcagacg
ctgctgttttccgccacctggccggatgcgattgccgccatcagtcaccgtattcagcgc
gatccgctgaccattgccatcgacacggtggatgaactgccggcggttgaacagcagttc
tatgaggtctcccgcagcggtaaaatcgacctgctgcaaaaactgctgagccgcgaacag
cccgcttcctgcgtggtgttctgcaataccaaaaaagattgccaggcggtatacgatgcc
ctgaccgacagtaaccagagcgtgctggcgctgcacggcgacatggagcagcgtgaccgc
gaccagaccctggtgcgcttcgctaacggtagcagccgtgtgttggtggcaaccgatgtt
gccgcgcgtgggctggatatcaaagcgctggagatggtgattaactacgagctgtcatgg
gatcccgaggtgcatgttcaccgcatcggccgtaccgcccgcgccggtgaaagtgggttg
gccatcagtctctgcgcgccggaagaggcccagcgtgcgaatgcgctggaagagatgctg
aatataaaactcaactggcatccgctgccgaccggactgcgcatcaccccgttggaagcc
acgatggcgacgctgtgcatcgacgggggtaagaaagccaaaatgcgtccgggcgatatt
ctgggggcgttaaccggcgacatggggctggatggcgctgatatcggtaagattgcgatt
catccgatgcatgcgtatgtggcggtgaagcagtcggtggcgcgccacgcgtggaagcag
ttgcagcaggggaaaattaaagggaaggcggtgaaggtcaggctgttgaagtag
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