Dickeya solani IPO 2222: A4U42_20430
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Entry
A4U42_20430 CDS
T04410
Name
(GenBank) oligogalacturonate lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00040
Pentose and glucuronate interconversions
dso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A4U42_20430
Enzymes [BR:
dso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
A4U42_20430
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Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
ANE77507
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Position
complement(4767352..4768518)
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AA seq
388 aa
AA seq
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MAKGKKLSFSFHTYQDSVTGTEVVRLTPPDVICHRNYFYQKCFSNDGSKLLFGGAFDGPW
NYYLLDLKTQQATQLTEGTGDNTFGGFLSPDDDALYYVKNVRNLMRVDLNTLEETNIYQV
PDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRIDLKTGEA
TTILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAPGESC
THEFWVPNGSALAYVSYLKGSTNRFICSVNPVTLENRQLTEMPPCSHLMSNYDGALMVGD
GCNAPVDVKDDGGYKIENDPFLYVFNMKTGKHFQVAQHNTSWEVLEGDRQVTHPHPSFTP
DDKHILFTSDVDGKPALYLAKVPDSVWQ
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggtaaaaagctttctttttcgttccatacctaccaggattcagtcaccggc
accgaagtggtgcgtctcacccctcccgatgttatctgtcaccgcaactacttctatcag
aagtgtttttctaatgatggtagcaagctgctgtttggtggtgcctttgacgggccgtgg
aactactatttgctggatctgaaaacccagcaggcaacgcaattaactgaaggtaccggc
gacaatacgtttggcggtttcctgtctccagatgatgacgcactctattatgtgaagaac
gtgcgtaatctgatgcgtgttgacctgaatacactggaagaaaccaatatttatcaggta
ccggacgactgggtcggatacggtacctgggttgccaactccgattgcaccaaaatggtc
ggtatcgagatcaaaaaagaggattggaaaccgctgaccgactggaaaaaattccaggag
ttctactttaccaatccatgctgccgtttgattcgtatcgatctgaaaaccggtgaagcc
accactattctgcaggaaaaccaatggctgggtcatcccatttaccgtccgggcgacgat
aatacagtcgcattctgccatgaaggcccgcatgacttggttgatgcacgtatgtggttc
atcaacgaagatggcaccaatatgcgtaaggtgaaagaacatgcgccgggtgaaagctgc
acccacgagttctgggtgccgaatggttctgcgctggcttatgtttcctatctgaaaggc
agcaccaatcgtttcatttgtagtgtcaatccggtaacgttggaaaaccgtcagctgact
gaaatgccgccgtgttctcacctgatgagcaactatgatggcgcgctgatggtgggagat
gggtgtaatgcgccggtggatgtgaaagatgacggtggttataagattgaaaacgatccg
ttcttgtatgtgttcaatatgaagaccgggaaacatttccaggttgcgcaacacaacacc
tcgtgggaagtgctggagggcgaccgtcaggtaacgcatccgcatccgtccttcacgccg
gatgacaaacacattctgtttacgtctgatgtcgatggcaagccggcgttatatctggca
aaagtgcctgattccgtctggcaataa
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