Dickeya solani IPO 2222: A4U42_20800
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Entry
A4U42_20800 CDS
T04410
Name
(GenBank) polyamine ABC transporter substrate-binding protein
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
dso
Dickeya solani IPO 2222
Pathway
dso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4U42_20800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dso02000
]
A4U42_20800
Transporters [BR:
dso02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
A4U42_20800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ANE77572
LinkDB
All DBs
Position
complement(4859248..4860519)
Genome browser
AA seq
423 aa
AA seq
DB search
MSQNEMLKAEPPAGGEGNRTSLKQQLRQAQARYQKRSLLLIAPLFLFILASFLFPILSIL
GKSVSNPDLRVSMPTTIEAMRQWSGKDVPDESVFQALVSDLRNARSTGQVATITKRLGYE
DGQYRQLITRTLRKLPSDEQQGLREQLIADQPMWGELTTWKTIDRASRPFTSYYLLAVFD
HKVDPQTDKVVAQPAEQALYVDVLLRTLLMAGVVTLLCVALGYPLAYWLAKQPDNRANLL
MILVLLPFWTSLIVRTASWIVLLQSGGLINRSLMGLGIIDEPLVLVFNRIGVYISMTHIL
LPFFVLPLYAVMKGISPNYVRAAISLGAHPFLAFWRVYVPQTYAGVTAGALLVFMMAIGY
YITPALLGGPGDQMLSYFVAFFTNTTMNWGMAAALGTQLLVIVVLLYVVYIRVTRTDADA
AAR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagaacgagatgttgaaggcagagccgcctgccggcggcgaggggaaccgaacc
agtctgaaacagcagttgcgtcaggcgcaggcccgctatcagaaacggtcactgttgctg
attgcaccgttgttcctgttcattctggccagttttctgttcccgatactgtcgattctg
ggcaaaagcgtgtccaacccggacctgcgcgtcagcatgccgaccactatcgaggcgatg
cggcaatggtccggcaaggatgtgccggatgagagcgtgtttcaggcgctggtaagcgat
ctgcgcaatgcccgcagcaccgggcaggtcgccaccatcaccaaacggttgggttatgag
gacggccagtatcgccagcttatcacccgcacgctgcgcaaactgccgtcagatgaacag
caagggctgcgcgaacagctgattgccgaccaaccgatgtggggcgaactgaccacctgg
aaaactatcgaccgcgcgtcgcggcctttcaccagctactacctgctggcggtattcgat
cataaggtggacccgcagaccgacaaggtggtggcgcaaccggcggagcaggcgctgtat
gttgacgtgctgctgcgcacgttgctgatggcaggggtggtaacactgctgtgcgtggcg
ttgggctacccgctggcctactggctggcgaaacagccggataatcgcgccaacctgctg
atgattctggtactgctgccgttctggacctcactgattgtgcgcaccgccagctggatc
gtgctgctgcagtccggtgggttgatcaaccgttcgctgatggggctgggaatcattgat
gagccgctggtgctggtgtttaaccgtatcggcgtctatatctccatgacccacattctg
ttgccgttcttcgtgttgccgctgtatgcggtgatgaaaggcatttcgcccaactatgtg
cgggcggcgatttcgctgggcgcgcatccgtttctggcgttctggcgggtgtatgtgccg
cagacctacgccggggtgaccgccggcgcactgctggtgttcatgatggcgattggctac
tacattacaccggcgctgctgggtgggccgggcgatcagatgctcagctattttgtggcg
ttcttcaccaataccaccatgaactggggaatggcggcggcgctggggacacaactgctg
gtgatcgtggtgctgctgtatgtggtgtatatccgtgtcacccgcaccgacgccgacgcg
gcggcgcgttaa
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