Dipodomys spectabilis (banner-tailed kangaroo rat): 122094925
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Entry
122094925 CDS
T07891
Symbol
Wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04136
Autophagy - other
dsp04140
Autophagy - animal
dsp05010
Alzheimer disease
dsp05014
Amyotrophic lateral sclerosis
dsp05016
Huntington disease
dsp05017
Spinocerebellar ataxia
dsp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122094925 (Wipi1)
04136 Autophagy - other
122094925 (Wipi1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122094925 (Wipi1)
05014 Amyotrophic lateral sclerosis
122094925 (Wipi1)
05016 Huntington disease
122094925 (Wipi1)
05017 Spinocerebellar ataxia
122094925 (Wipi1)
05022 Pathways of neurodegeneration - multiple diseases
122094925 (Wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dsp04131
]
122094925 (Wipi1)
03029 Mitochondrial biogenesis [BR:
dsp03029
]
122094925 (Wipi1)
Membrane trafficking [BR:
dsp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122094925 (Wipi1)
Mitochondrial biogenesis [BR:
dsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122094925 (Wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_VPS8
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_RSE1_2nd
BCAS3_WD40
Beta-prop_EML
EIF3I
DUF5711
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
122094925
NCBI-ProteinID:
XP_042521376
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MEAEAVDAPPGEFEGALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEHLDQVHGSNEIPDV
YIVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYPSNILSIRLNRQRLLVCLEES
IYIHNIKDMKLLKTLLDIPPNPTGLCALSINHSNSYLAYPGSQTTGEIVLYDGNSLKTVC
TIAAHEGSLAALAFNSSGSRLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLANSRPEEPSTWSGYMGKVFMAATNYLPAQVSDMMNQ
DRAFATGRLNFSGQKNICTLSTIQKLPRLLVASSDGHLYIYNLDPQDGGDCVLIKTHSLL
GSGTTEESQENDLRPSLPQSYAATVARPSASSASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKPS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggctgtggacgcccctccgggcgagttcgagggggcgctcagctgcttc
tctttcaaccaagactgcacatccctagccattggaaccaaagccggttacaagttgttt
tctttaagttctgtggagcatctggaccaagtccatggaagcaacgaaatcccggatgtg
tacatcgtggagcgcctcttctccagcagcctggtggtggtcgtcagccacacaaaacca
cgccagatgaacgtgtatcacttcaagaaaggcaccgagatctgtaattacagctacccc
agcaacattctgtccataaggttgaaccggcagaggctgctggtctgcttggaggaatcc
atttatatccacaacattaaagatatgaagctgttgaagaccctcctggatattcctcct
aacccaacaggtctgtgtgccctctctatcaaccattccaattcttacctggcctatcct
ggaagccagacaacaggcgagattgtgctttatgatgggaactccctgaaaactgtctgc
accatcgcagcccatgagggatcgctggctgcccttgccttcaactcctcaggctccaga
ctagcgagcgcgtcggagaaaggcacagtcatccgggtgttctctgtacctgacggacaa
aagctctatgagttccggagaggaatgaaaaggtatgtgacgatcagctccctagtcttc
agtatggactctcagttcctgtgtgcctccagcaacacagagaccgtgcacatcttcaag
ctggaacaccttgccaatagccgcccagaagagccttccacatggagtggctacatgggg
aaggtgttcatggctgctaccaactacctccccgcccaggtgtccgacatgatgaaccag
gacagggcctttgccacgggccgcctgaacttctccgggcagaagaatatctgcacgctc
tcgacgatccagaaactgccaaggcttctcgtggcctcctctgacggacacctttacatc
tacaacttggaccctcaggacggcggagactgtgtcttaatcaaaactcacagcttgctt
ggctccggaacaaccgaagagagccaagaaaatgacctcagaccttccttacctcagtct
tacgcagccacagtagccagaccaagtgcatcttcagcctccacagtgccaggctattct
gaggacggcggggcgctccgaggagaggtgattccggaacacgagtttgccacaggacca
gtgtgtcttgatgacgagaacgaatttccccctataatcttgtgccgtgggagtcagaag
ggcaaaacgaagccatcctga
DBGET
integrated database retrieval system
