Dipodomys spectabilis (banner-tailed kangaroo rat): 122094948
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Entry
122094948 CDS
T07891
Symbol
Nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03013
Nucleocytoplasmic transport
dsp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122094948 (Nup85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122094948 (Nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122094948 (Nup85)
03036 Chromosome and associated proteins [BR:
dsp03036
]
122094948 (Nup85)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122094948 (Nup85)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122094948 (Nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
TPR_19
Motif
Other DBs
NCBI-GeneID:
122094948
NCBI-ProteinID:
XP_042521404
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MEELDGEPTITLIPGMNSKKKQMCFDWGPGEMLVCETTFDKKEKSETVPNCPFIHIVRKD
VDVYSQILRKLFNESHGIFVGLQRIEEELTGKSRKAQLVRVSKNYRSVIRACMEEMHQVA
IAAKDPASGHRYSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDTL
SADVLGSENPSKHESFWNLVTILVLQGRLDEARQMLSKEADANPPSAGMCRILGELMRTM
PVLSPGNTQTLTELELKWQHWCEECERHLQDGTFAANPHLECLCKIMLGDEATLLEQKEL
LSNWYHFLVTRLLYSHPTVKPIDLHFYAQSSLDMFLGGESSSEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLA
VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSVRAKDAAFATLVSDRFLKDYCERGCFSDLDLIDNLGPAMMLSDRLTFLGK
YREFHRLYGEKRFGDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MRCLEDLTSGKLECAEFDAHRLQDDDIETTKVEMLRLALARNLARAIVREGSLEGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcttgacggcgagcccaccatcaccttgattccaggtatgaattctaagaag
aagcaaatgtgttttgactggggtcctggggaaatgctggtgtgtgaaaccaccttcgac
aaaaaagaaaaatcagaaacagtgccaaactgcccctttatccatattgttcggaaagat
gtagatgtttactctcaaattttgagaaaactcttcaatgaatcacatggaatctttgtg
ggactccagagaattgaagaagaattgactggaaaatctaggaaagctcaattggttcgt
gtgagtaaaaactaccgatcagtcattagagcatgtatggaagaaatgcaccaggtggca
attgctgctaaagatccagccagtggccaccggtatagcagtcaggtctccattttgtct
gcaatggaacttatttggaatctgtgtgagattctttttattgaagtagctccagctggc
cctcttcttcttcacctccttgactgggttcgactccatgtgtgtgaggtggacacgttg
tcggcagatgttttgggcagcgagaatccgagcaaacatgagagcttctggaacttggtg
accatcttggtgctgcagggccggctggatgaggcccgacagatgctgtccaaagaggct
gacgctaaccccccctctgcaggcatgtgccgcatcctaggggaactgatgaggacaatg
cccgttctcagtcctggcaatacccagacactgacggagctggagctgaagtggcagcac
tggtgtgaggagtgtgagcggcacctgcaggatggcacgttcgctgccaatccccatcta
gagtgtctctgcaagatcatgctgggggatgaggccaccttgctggagcagaaggagctg
ctgagtaactggtatcacttcctggtgacccgcctgctctactcccaccccacggtgaaa
cccatcgacctgcacttctatgcccagtccagcctggacatgtttctgggaggggagagc
agctcagagcccttggacaacattttgatggcagccttcgagtttgatatccaccaagtg
atcaaggagtgcagcattgctctgagcaattggtggttcgtggctcacttgacagacctg
ctggatcactgtaaactcctccagtcacacaacctctactttggttccaacatgagagag
tttctcctgctggaatatgcctcgggactctttgctcaccacagcctatggcagctggcg
gtggattactttgactactgccctgagctggggcgagtttccttggagctccacattgag
aggatccccctcaacacagagcagaaagccctcaaggtacttcggatttgtgagcagcgg
cagatgactgaacaagtgcgcagcatctgcaagatcttagccatgaaggctgttcgcaat
aatcgcctgggctctgcactctcctggagcgtccgtgccaaagatgctgcctttgccaca
ctcgtgtcagacaggttcctcaaggattactgtgagcgaggctgcttttctgacttggac
ctcattgacaacctagggccagccatgatgctgagtgatagactgacatttctgggaaag
taccgggagttccaccggctgtatggggagaagcggtttggtgacgctgcttctcttctg
ctctctctcatgacttctcaaattgcacctcgctccttctggatgactctgcttacagac
gccctgccccttttggaacagaaacaggtgattttttcagcagaacagacttacgagctg
atgcgatgtctggaggatttgacttcagggaagttggagtgtgcagagtttgatgctcat
cgactccaggatgacgacatagagaccaccaaggtggagatgctgagactggctcttgcc
cggaaccttgcccgggcaattgtgagagaaggctcattagaaggctcctga
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