KEGG   Dipodomys spectabilis (banner-tailed kangaroo rat): 122095188
Entry
122095188         CDS       T07891                                 
Symbol
Hltf
Name
(RefSeq) helicase-like transcription factor isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
dsp  Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:dsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dsp04121]
    122095188 (Hltf)
   03400 DNA repair and recombination proteins [BR:dsp03400]
    122095188 (Hltf)
Enzymes [BR:dsp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122095188 (Hltf)
Ubiquitin system [BR:dsp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122095188 (Hltf)
DNA repair and recombination proteins [BR:dsp03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    122095188 (Hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 DEAD RING_XB3-XBAT31 ResIII zf-RING_5 zf-C3HC4_4 zf-ANAPC11 zf-Nse HDA2-3 zf-rbx1 Prok-RING_4
Other DBs
NCBI-GeneID: 122095188
NCBI-ProteinID: XP_042521567
LinkDB
Position
Unknown
AA seq 1026 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPNNPYDKNAIKVNNVNGNQVGHLKKDLAAALA
SIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGF
SLESGWNSGRAGPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTHEMEPAEAVETPL
LPHQKQALSWMISRENSKDLPPFWEQRNDLYYNTITNFSEKDRPENVHGGILADDMGLGK
TLTAIAVILTNFHDGSPLPVERVKKNQQKKLMKEILPFTQEHKDYTVNSAPVKLGRDCTR
GEADGLSKVEGPRCSEAPSISNIKKKKPPMSEPSSSRPKRRKTVVQYIESSDSEEAETSE
LPQKMKGKLKHVQSETRSRVKAGSSKVKEDIAFNCALTSSTPTTKKKMLKKGGSAVVGSK
KSEIEERPRTTLIICPLSVLSNWIDQFGQHIKSEVHLNFYVYYGPDRIRDPALLSKQDIV
LTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGT
PIQNSLKDLWSLLSFLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKT
SKIKGKPVLELPERKVFIQHITLSDEERQIYQSVKNEGKATIGRYFNEGTVLAHYADVLG
LLLRLRQICCHTHLLTNAGSASGPSAFSLGNDTPEELRKKLIRKMKLILSSGSDEECAIC
LDSLTVPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRHDIHGDSLLECPPEELACDSER
KSSTEWTSSSKINALMHALIELRTKNPNIKSLVVSQFTTFLSLIETPLKASGFVFTRLDG
SMAQKKRVESIQCFQNTEEGSPTVMLLSLKAGGVGLNLCAASRVFLMDPAWNPAAEDQCF
DRCHRLGQKQEVIITKFIVKDSVEENMLKIQNTKRELAAGAFGTKKTNANETKQAKINEI
RTLIDL
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgtcgtggatgtttaagagggatcctgtttggaagtacttgcagactgtccagtatggt
gtccatggaaattttccacgcctctcatatccaactttctttccacggtttgaatttcaa
gatattattcctccagatgacttcctaaccagcgatgaagagctagattcagttttattt
ggaacattgagaggtcatgtggttgggctacgctattacactggagtagttaataataat
gaaatggttgcattacaacgagagcccaataacccgtatgataagaatgcgatcaaagtg
aataatgtgaatggaaatcaggttggccatttaaagaaagatcttgcagctgctttggcc
tctatcatggacaacaaattggcacaagtggaaggggtagttccttttggtgcaaacaac
gcttttaccatgcccttgcatatgactttttggggaaaagaagaaaatagaaaagcagtt
ttggatcagttgaagaaacatggatttaaactgggtccagcaccaaaaactttaggattc
agtttggaaagtggttggaactctggaagagctggaccaagctatagtatgccagttcat
gctgcagtacagatgacaactgaacagcttaaaacagaatttgacaaattgtttgaagat
ttaaaagaagatgataaaactcatgagatggaaccagctgaggctgttgaaacaccgttg
cttccccatcagaaacaagctctgtcttggatgatttcaagagaaaacagtaaagacctt
ccaccattctgggaacagagaaatgacttatactacaacaccataacaaatttttctgag
aaggaccgaccagagaacgtccatggagggattttagctgatgatatgggtttgggtaaa
actctaacagccattgcagtaattcttaccaacttccatgatggcagccctcttcctgtt
gaaagagttaaaaagaatcaacagaagaagctgatgaaggaaatactgcctttcacccag
gagcataaagactatactgtgaacagtgcccctgtgaaacttggaagggactgtaccaga
ggagaggcagatgggctgagcaaagtagaaggacccagatgtagtgaagcaccaagtatt
tcaaatatcaagaagaaaaagcctcctatgtcagaaccctccagctcccgccccaaaaga
agaaaaactgtggttcagtacattgaaagcagcgattcagaggaggctgagacaagtgag
ttaccccagaaaatgaaaggcaaactaaaacatgtacagtcagagactagaagtagggta
aaagcaggatcatctaaggttaaagaagatatagcattcaattgtgcacttacatcatct
accccgacaacaaaaaagaaaatgttaaaaaagggaggatctgcagtggtgggttcaaaa
aagtctgagattgaagagcgacctcgaacaactctgatcatctgcccactttctgtatta
agcaactggattgatcagtttggacagcatataaagtcagaagtgcacttgaatttttat
gtttattatgggcccgatcgtattagagacccagctttgctttcaaaacaggatattgtt
ttgactacatacaacattttaactcatgactatggaaccaaaggcgacagtccgttgcac
agcataaggtggcttagggtgatcttggatgaaggacatgccatacgaaatccaaatgct
cagcagacaaaagctgtacttgatttagaagcagaaagaagatgggtattgacaggtact
cctatccagaattctttaaaggatctgtggtctcttctctcctttttaaaactgaagcca
tttcttgatagagaatggtggcatagaacaattcagcgtcctgtaacaatgggagatgaa
ggaggacttaggcgtttacagtccctaattaaaaatatcacacttagaagaacaaagaca
agcaaaattaaaggaaagcctgttttggaactcccagaacgtaaagtatttattcagcat
atcacactttcagatgaagagagacagatttatcagtctgtgaaaaatgaaggcaaagct
acgattggaaggtatttcaacgaagggaccgtcttggcgcactatgcggatgtcctgggt
cttttgctcagactgcggcagatttgctgtcacactcaccttcttacaaatgctgggtct
gctagtggcccctcagccttttctctagggaacgatacacctgaagaattgagaaagaag
ttaataaggaagatgaaattaattctgagctcaggttcagatgaagaatgtgcaatttgc
ttggattccttaacagttcctgtgataacacactgtgcacacgtgttctgtaagccttgt
atttgccaagtcattcagaatgagcagccgcatgcaaagtgcccattatgcagacatgac
atacatggggacagtctcttagaatgccctcctgaagaactggcatgcgacagtgagagg
aagtccagcacggaatggacatctagttctaagattaatgctctaatgcatgctttgatt
gagttaagaacaaagaatcccaacattaaaagtttggttgtttctcagtttactacattc
ctgtctttaatagaaacaccattaaaagcctcaggatttgtgtttacacgtttggatggt
tccatggcccaaaagaaaagagttgaatcaattcagtgttttcaaaacacagaagaaggc
tctccaactgtaatgctgctgtccttaaaagcgggtggagttggtttgaatctttgtgca
gcttctcgagtgtttttaatggatccagcctggaaccctgctgcggaagaccagtgcttt
gacagatgccacaggctgggccagaagcaagaggtcatcatcacaaaattcattgtgaag
gattctgttgaagaaaatatgctgaaaatacaaaacacaaaacgagaacttgcagctgga
gcttttgggacaaagaaaacaaatgctaacgaaacgaaacaagctaaaattaacgaaatc
agaactttaattgatttataa

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