Dipodomys spectabilis (banner-tailed kangaroo rat): 122095193
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Entry
122095193 CDS
T07891
Symbol
Rnf13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122095193 (Rnf13)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122095193 (Rnf13)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122095193 (Rnf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
Prok-RING_4
DUF7027
zf_RING_Vps8_fungal
Neur_chan_memb
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122095193
NCBI-ProteinID:
XP_042521582
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MLLSIGMLMLSATQIYTILTVQLFASLNLLPVEASILAYNFENASQTFEDLPARFGYRLP
TEGLKGFLINSKPENACEPIAPPPLKDNSSGTFVVLIRRLDCNFDIKVLNAQRAGYKAAI
VHNVESEDLISMGSNDIDILKKIDIPSVFIGESSANSLKDEFTYEKGGHIILVPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSR
EENEVSEHTPLLRPFASASTPSFGALSEAHSQQNVTESSEYEDTDSSDAENEGSDHSVVV
QLQPGEHDYNIANTV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctccataggaatgctcatgttgtcagccacacaaatctacaccatcctgact
gtccagctctttgcatctctaaacctactgcctgtagaagcaagcattttagcatataat
tttgaaaatgcatctcagacatttgaggatctcccagcaagatttggttatagacttcca
acggaaggtttaaagggttttttgattaactcaaagccagagaatgcttgtgaacccata
gcacctccaccactaaaagacaattcatctggcacttttgttgtgctaattagaagattg
gactgtaattttgatataaaggttttaaatgcacagagagcaggctacaaagcagccata
gttcacaatgttgagtctgaggacctcattagcatgggatccaacgacattgatatatta
aagaaaattgacattccatctgtctttattggtgaatcatcagcaaattctctgaaagat
gagttcacatatgaaaaagggggccacattatcttagttcctgaatttagccttcctttg
gagtactatctgatccccttcctcatcatcgtgggcatctgtctcatcttgatagtcatt
ttcatgatcacaaaatttgtccaggacagacatagagctagaagaaacaggcttcgtaaa
gaccaactcaagaaactccctgtacataaattcaagaaaggagatgagtatgatgtctgt
gccatttgtctggatgagtatgaggatggagacaagctcaggatcctcccctgttcccat
gcttaccactgcaagtgtgtagacccttggttaacaaaaaccaaaaaaacatgtcctgtt
tgcaagcagaaagttgttccttctcaaggcgattcagactctgacaccgacagcagccga
gaagagaacgaagtgtcggagcacacccctctgctcaggccattcgcctctgccagcacc
ccgtccttcggagcactgtcggaagcacactcacagcagaacgtgaccgagtcctcggaa
tacgaggacacggacagcagtgacgctgagaacgaaggtagcgaccacagtgttgtggtc
cagctgcagcctggtgaacatgattacaacatagcaaacaccgtgtga
DBGET
integrated database retrieval system
