Dipodomys spectabilis (banner-tailed kangaroo rat): 122095256
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Entry
122095256 CDS
T07891
Symbol
Col10a1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
122095256 (Col10a1)
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Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
122095256
NCBI-ProteinID:
XP_042521674
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All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MLPQRAFLLLMFLNLVHGRFYDERYQTPTGIKGPPPNTKTQFFIPYSIKRNGIPVRGEQG
IPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGLSATGKPGLPGLQGKPGER
GPYGPKGDIGPAGLPGPRGPPGPPGIPGPAGISVSGKPGQQGPTGAPGPRGFPGEKGAAG
APGLNGQKGEAGYGAPGRPGERGLPGPQGPMGPPGPPGVGKRGENGFPGQPGIKGDRGFP
GERGASGPPGPQGPPGERGREGIGKPGAAGLPGQPGIPGTKGHPGVPGSDGPPGPPGFGK
PGLPGVKGPRGPTGLPGGPGAKGEQGPAGHPGEPGLSGPPGNMGPQGPKGIPGSHGLPGP
KGDIGPVGPAGPPGARGSRGPPGLDGKPGYPGEPGLNGPKGNPGLPGPKGDPGVGGPPGL
PGPAGAVGAKGIPGHNGEAGPRGTPGMPGTRGPIGPPGIPGFPGSKGDPGNPGPPGPAGI
ATKGLNGPTGPPGPPGPRGHNGEPGLPGPPGPPGPPGQAVPPEGFIKAGQRPSLSGMPLV
SANQGVTGMPVSAFSVILSKAYPAIGAPIPFDKILYNRQQHYDPRTGIFTCRIPGIYYFS
YHIHVKGTHAWIGLYKNGTPVMYTYDEYSKGYLDQASGSAIMDLTENDQVWLQLPNAESN
GLYSSEYVHSSFSGFLVAPM
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgctgccacagagagcctttctgctgctcatgttcttgaacttggttcatggaaggttt
tatgatgagcgataccaaacacccactggcataaaaggcccaccacccaacaccaagacc
cagtttttcattccctatagcataaagaggaatggtataccagtaagaggtgagcaaggt
attcctggcccaccgggccccgctggacctcgaggacacccgggtccctctggaccacca
ggaaaaccaggctatggaagtcctggactccaaggagagccaggattgccgggcccacca
ggattatcggccactgggaaaccaggtttgccagggctccaaggaaagcctggagagaga
ggaccgtatggaccaaaaggagatattggacctgctggcttaccaggacctcggggccca
ccaggaccccctggaatccccggcccagctggaatttctgtgtcaggaaaacctggacaa
cagggacctacaggcgctccaggacctaggggctttcctggggaaaagggagcagcagga
gcccctgggctgaatggacagaaaggggaagctggatatggtgcgcctggccgcccaggg
gagaggggccttccaggccctcagggtcccatgggaccacctggtcctcctggcgtggga
aaaagaggtgagaatgggtttccaggacagcctggcatcaaaggtgatcggggtttccca
ggagaaagaggagcaagcggcccaccaggtccacaagggcctcctggggaacgaggacgg
gaaggcattggaaagccaggcgctgctggacttccgggccagcctgggattccggggaca
aaaggccaccctggggttccaggaagtgatgggcctcctgggcctcctggctttgggaag
ccaggtttgcctggtgtaaagggaccacgaggacctactggtctcccggggggtccaggg
gccaaaggggaacaagggccagcaggtcatccaggggagccagggctgagtggacctcct
ggtaatatgggtccccaaggaccaaaaggcatcccaggaagccatggtcttccaggccct
aaaggtgacatagggccagttgggcctgcaggaccccctggggctagaggatcaaggggt
ccccctgggttagatggaaaaccaggatacccaggagaaccagggctcaatggtcctaag
ggcaacccagggttaccaggcccaaaaggtgaccctggagtgggaggacctcctggactc
ccaggccctgcaggtgcagtgggagctaaagggatacctggacacaatggtgaagctggt
ccaagaggtactcctggtatgccaggcaccaggggtcccattgggcccccaggtattcca
ggattccctggatctaaaggtgatcctggaaacccaggtcctcctggcccagctggcata
gcaactaaaggtctgaatggacccacagggccaccagggccgccgggtccaagaggccac
aatggagagccaggtcttcccggccctccaggccctccaggacccccaggccaagcagtc
ccgcctgagggctttataaaggcagggcaaaggcccagtctttctgggatgcctcttgtc
agtgccaaccagggggtaactggaatgcctgtgtctgctttcagtgttattctctccaaa
gcttacccagccatcggtgctcccatcccatttgataagattttatataacaggcaacag
cattatgacccaagaacaggaatctttacctgcaggatcccaggaatatactatttctcc
tatcacattcatgtgaaaggcactcatgcttggataggcctgtataagaatggcaccccg
gtaatgtacacctatgatgagtattccaaaggctacctggatcaggcttcaggcagcgcc
atcatggatctcacagaaaatgaccaggtgtggctccagctgcccaatgctgagtcaaat
ggcctatattcgtcagagtatgtccattcctccttctcaggattccttgtggctcccatg
taa
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