Dipodomys spectabilis (banner-tailed kangaroo rat): 122095395
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Entry
122095395 CDS
T07891
Symbol
Cul4b
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03420
Nucleotide excision repair
dsp04120
Ubiquitin mediated proteolysis
dsp05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122095395 (Cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
122095395 (Cul4b)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
122095395 (Cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122095395 (Cul4b)
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122095395 (Cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsp04147
]
122095395 (Cul4b)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
122095395 (Cul4b)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122095395 (Cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122095395 (Cul4b)
Exosome [BR:
dsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122095395 (Cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
122095395
NCBI-ProteinID:
XP_042521737
LinkDB
All DBs
Position
Unknown
AA seq
910 aa
AA seq
DB search
MKSVCPVTSGFSSPNPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSSSSTSSSSS
TNSSNEREDFDCSSSFSSIPPLQPRDSASPSTSSFCLGVSVASSSHIPIQKKLRFEDTLE
FVGFDAKMAEESSSSSSSSSPTAATSQQQQLKNKSILISSMTSVHHANGLAKSSTTVSSF
ANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVEN
LCSYKISANLYKQLRQICEDHIKAQIHQFRDMDSLDSVLFLKKIDRCWQNHCRQMIMIRS
IFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQNKTIDGILLLIERERNGEAIDR
SLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQKLMQEREVPEYLHHVNKRLEEEA
DRLITYLDQTTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLSLLYQLFSRVRG
GVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFLKNEKFINAMK
EAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEA
FYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQV
KYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQW
QSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQ
SLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVF
QDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDK
ENPNQYNYIA
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgtctgcccagtcacttccggtttttcttcccccaatccctcagctgctgct
gctgcacaggaggtcagatctgccactgatggtaataccagcactactccgcccacctct
gccaagaagagaaagttaaacagcagcagcagcagtagcagcaccagcagcagtagcagc
actaatagtagtaacgagagagaagactttgattgctcctcttccttctcatccattcct
cccttacaacccagggattcagcatccccttcaacctcctccttctgcctaggtgtttca
gtggcttcttctagccacataccaatacagaagaagctacgttttgaagacaccctggag
tttgtagggtttgatgcgaagatggctgaggaatcctcctcctcctcctcctcatcttca
ccaactgctgctacatctcagcagcagcaacttaaaaataagagtatattaatttcttct
atgacttcggtgcatcatgcaaacggcctagccaaatcttctaccaccgtctctagtttt
gctaacagcaagcctggctctgctaagaagttagtgatcaagaactttaaagataagcct
aaattaccagaaaactacacagatgaaacatggcagaaactgaaagaagcggtagaagct
attcagaatagtacttcgattaagtacaatttagaagaactctatcaggctgtagaaaat
ctttgttcttacaagatttctgcaaatttgtataaacagctgaggcagatttgtgaagat
cacatcaaagcgcagattcatcagttcagagatatggattcattggatagtgttcttttt
ctaaagaagattgacagatgctggcaaaaccactgtaggcaaatgataatgattagaagc
atttttttgtttctggatagaacttatgttcttcagaattcaatgctaccttccatttgg
gacatgggactagaattatttagggctcatattataagtgatcaaaaagtccagaataag
acaattgatggcattcttctcttgattgagagggagaggaatggtgaagcaattgataga
agtttactccgaagccttttaagtatgctttctgatttgcaaatttatcaagattctttt
gaacagcgatttttggaagaaactaacaggctctatgcagctgaaggccaaaagttaatg
caagaaagagaggttcctgaatatcttcatcatgttaacaaacgtctagaagaagaagca
gacagacttattacttacttagatcagaccacccagaaatcattaattgctactgttgaa
aagcaacttctaggtgaacacttaacagcaattcttcagaaaggtttaaataacctcctt
gatgaaaaccgaattcaagatttatctctcctgtatcagctctttagccgagttcgaggt
ggagttcaggttctcttgcaacagtggattgaatacatcaaggcctttgggagtactatt
gttattaatcctgaaaaagataaaaccatggttcaagaattgctggattttaaagataaa
gttgaccatataattgatatctgctttctgaagaatgaaaaatttatcaatgccatgaaa
gaggcatttgaaacattcattaacaaaagaccaaataaacctgctgaacttatagctaag
tatgtggactcaaagcttcgtgcaggaaataaggaagctacagatgaagaacttgagaaa
atgttggataaaatcatgatcatatttagatttatctatggcaaggatgtttttgaggcc
ttctataagaaagatttagccaaacgcctgttagttgggaagagtgcatctgtagatgct
gaaaaatcaatgctgtccaaacttaagcatgaatgtggagctgctttcaccagcaaactt
gaaggaatgtttaaagacatggaactttctaaagacatcatgattcagttcaaacaggta
aaatatatgcagaatcagaatgttcctgggaatattgaattaactgtgaatatcctgaca
atgggttattggccaacatatgtgcctatggaagtccatttgccaccagagatggtaaaa
ctacaggaaattttcaagacattttacctaggtaaacacagtggcaggaaactccagtgg
caatcaacccttggacactgtgtgctaaaagcagaatttaaagagggtaaaaaagaactc
caagtgtctctttttcaaacactggtgctgctaatgttcaatgagggggaggagttcagt
ttagaagagatcaagcaggctactggaatagaggatggagagttaaggagaacactgcaa
tcattagcttgtggcaaagctagagtcttggcaaaaaatccaaagggcaaagacattgaa
gatggtgacaagttcatttgtaatgatgatttcaaacacaaacttttcaggataaagatc
aatcaaatccagatgaaagaaacggttgaagaacaagcaagtactacagaaagagtattt
caagatagacaatatcaaattgatgctgcaattgttcgaattatgaagatgagaaagaca
cttagccataatcttcttgtttcagaagtatataaccagttaaaatttccagtaaagcct
gctgatctaaagaagagaatagaatctttaattgatcgggactacatggaaagagataaa
gaaaatccaaatcagtacaactatattgcttag
DBGET
integrated database retrieval system
