Dipodomys spectabilis (banner-tailed kangaroo rat): 122095557
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Entry
122095557 CDS
T07891
Symbol
Dcaf1
Name
(RefSeq) DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
122095557 (Dcaf1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dsp01001
]
122095557 (Dcaf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122095557 (Dcaf1)
Enzymes [BR:
dsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122095557 (Dcaf1)
Protein kinases [BR:
dsp01001
]
Serine/threonine kinases: Other
Other
122095557 (Dcaf1)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122095557 (Dcaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
122095557
NCBI-ProteinID:
XP_042521789
LinkDB
All DBs
Position
Unknown
AA seq
1507 aa
AA seq
DB search
MTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVALRQDNKRPSPRKLFSEPLLPLDEEAVDMDYGDMAVDVVDGEHEEASGDMEIS
FHLDSSHKTSSRANSATKPEEGALKKNKSAKQGDRESFRKAKQKLGFSSSEPDRVFVELS
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTISTVGIS
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEH
TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTATASPVSLP
RTPRIANGIATRLGSHAAVGATAPSAPIAHPQPRPPQGSLALPGPSYAGNSPLIGRISFI
RERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCK
NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRF
RPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH
LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA
HIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM
NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD
LMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNM
DTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED
DNNENPGEDGDNDFSPSDEELANLLEEGEDGEDEDSDADEEVELILGDTDSSDNSDLEDD
IILSLNE
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagcagtacatgtggactccaaagctgagctcactaccttgttggaacaa
tgggaaaaagaacatggcagtgggcaagacatggtacctatccttaccaggatgtctgaa
ttaattgaaaaagaaactgaagaatatcgtaaaggagatccagacccatttgatgatcga
catcctggtcgagctgatccagagtgtatgctgggccacttgctgagaatactcttcaag
aacgatgatttcatgaatgcactggtgaatgcctatgtgatgacgagccgagagccccct
ttaaacactgcagcttgcaggctgctgctggacatcatgccaggcctggaaactgctgtt
gtttttcaggaaaaggaaggaattgttgagaatcttttcaaatgggcccgagaggctgat
caaccattgaggacatattctactgggttgttaggaggtgctatggaaaatcaagacatt
gctgctaactacagggatgaaaattcccagctggtggctatagtgcttcgaagactgagg
gagctccagctccaagaagtggctctgcggcaggacaacaagcgtcctagcccacggaag
ctcttctctgaaccccttttgcctctggacgaggaagctgtggatatggactatggtgat
atggcagtggatgtggtggatggagagcatgaggaagcttctggagacatggagatctcc
tttcaccttgactcaagccacaagacgagcagtagagcgaactcagcaaccaaacccgag
gaaggagcattgaagaaaaataagtcggcaaaacagggtgacagagagagctttaggaaa
gccaaacagaagctgggtttctcgtcttctgaaccagaccgtgtgtttgttgagctgtct
aatagcagctggtcagaaatgtccccctgggtgattggcaccaattataccctttaccct
atgactcctgctattgagcagcggctcatcctccaatatttgacccctctaggagagtat
caggagctacttcccatatttatgcagcttggatcacgagagttgatgatgttttatatt
gatctgaaacagactaatgatgtcctgcttacatttgaggcactcaagcacctagcgtct
ctcctgctgcataacaaatttgccacagaatttgttgcgcatggtggggtacagaaatta
ctggaaattcctcgtccttctatggcggcaactggcgtatccatgtgtttgtattacctg
tcctacaaccaggatgctatggaaagagtttgcatgcatccccacaatgttctctccgat
gttgtgaactataccctgtggttgatggaatgttctcacgcatcgggatgctgccatgct
accatgttcttctcaatttgcttctccttccgggctgtcttggaactctttgaccggtat
gatggtcttcgtcgtctggtgaacttgatcagtactttggaaattctaaatttggaagat
cagggtgcacttctaagtgatgatgaaatattcgctagccgccaaactgggaaacatacc
tgcatggccttgcgcaagtattttgaggctcatctggccattaaattggaacaagtaaag
caatcacttcagaggactgagggtggtattcttgttcaccctcaacccccatacaaggct
tgttcctacactcatgaacagattgtggaaatgatggagtttttgatagaatatggcccg
gcacaactctattgggaaccagctgaagtcttcctcaaactttcctgtgtacaactcttg
ttgcagcttatttctattgcctgcaattggaagacctattatgcaaggaatgacaccgtg
cgctttgctttggatgtcttggctattctcactgtggtgccaaaaatccaactccagttg
gcagagtcagtggatgtgttggatgaggctggctctaccatctccactgtaggtatcagc
attatattgggagtggctgagggtgagttctttatccatgatgctgaaattcagaagtca
gcacttcaaattatcatcaattgtgtgtgtggcccggataaccgaatatccagtattggc
aagtttatctccggaacgcctcggagaaagctgcctcagacccccaagagcagtgagcat
accctggccaagatgtggaatgtggtccagtccaacaacggcatcaaggtgcttctgtcc
ttactgtccatcaagatgcccatcacagatgcagaccagatcagggctctggcctgcaag
gccctggtgggcctgtctcgcagtagcacggtacggcagatcatcagcaaactgcccctt
ttcagcagctgccagatccagcagttgatgaaggagcccgtgctgcaggacaaacgcagt
gaccatgtcaaattctgcaagtatgctgctgaactcatagagcgggtgtcaggaaagcct
cttctcattggcacggatgtgtcactggcacggctacagaaagcagatgttgttgcccag
tcacggatctccttccccgagaaagagctgcttctgttgataagaaaccatcttatttct
aaagggcttggagagacagcaactgtgctgacgaaagaggctgacctgcccatgaccgcg
gcctcccattcttctgccttcaccccagtaactgctactgcttctcctgtctctcttccc
cgaacccctcgcattgctaatggcattgcaactcgactgggtagtcatgccgccgtgggc
gccactgccccttccgcccccattgcccaccctcagccacggcccccccagggttcactc
gctctgcctggcccgtcttatgcaggcaactcccctttgattggtaggatcagttttatc
agagagagaccgtcaccttgcaatgggaggaaaatccgtgtgctgcggcagaagtcggac
catggtgcctacagccaaagcccagccatcaaaaagcagttggatagacaccttccttcc
ccacctacgctggacagtatcatcacagaatatcttagagagcaacatgctcgctgcaag
aacccagttgccacctgcccacctttctctctttttactcctcaccaatgtcccgagcca
aaacagaggcggcaagcgccaataaactttacctcgaggctaaaccgcagggcatcattt
ccaaaatacggaggggtggatggtggctgctttgataggcatctgatcttcagcaggttt
cgtcccatttcagtattccgggaagctaatgaagatgagagtggtttcacgtgctgcgcg
ttctcagcacgggagcggttcctgatgctggggacctgcacagggcagctgaagctctac
aatgtgttcagcggacaggaggaagccagctacaactgccacaattcggccatcacacac
cttgagccttccagggatgggtccttgctgctgacgtctgccacatggagccagccgttg
tccgcactttggggaatgaaatctgtatttgatatgaagcattccttcacggaagatcac
tatgttgagttcagtaagcactctcaggatcgggttataggcacaaaaggagacattgcc
catatttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgcc
aacaactacaagaggaactgtgccacctttaaccctacagatgatcttgtgttaaatgat
ggcgtcctctgggatgtccgctctgcacaggccatccacaagtttgacaagttcaacatg
aacatcagcggtgttttccatccgaatgggctggaggtcatcatcaatactgagatttgg
gaccttcgaactttccacctgttacacacggttcctgctctggatcagtgtcgcgtggtg
ttcaaccacacgggaacagtgatgtatggagctatgttgcaggcagatgatgaagatgac
ttaatggaagagaggatgaaaagcccttttgggtcatccttccgcacgtttaacgcaact
gattacaagcctatagcaaccattgatgtgaagcggaacatctttgacctgtgcacagac
accaaagactgctatctagccgtcatcgagaatcaaggcagcatggatgctctaaacatg
gacacggtatgcagactttatgaagtaggcagacagcggctggccgaggatgaggacgaa
gaagaggaccaggaagaggaggagcaggaggaagaggacgatgatgaagatgatgatgac
actgatgacctagatgaactcgacaccgaccagctgctggaggcagagctggaggaggac
gacaacaatgagaaccccggggaggacggggacaacgacttctccccctcggacgaggag
ctggccaacctgctggaggagggcgaggacggggaggacgaggactccgatgccgatgag
gaggtggagctcatcctgggcgacactgacagctcagataactctgatttggaagatgac
atcatcttatctctgaatgagtga
DBGET
integrated database retrieval system
