Dipodomys spectabilis (banner-tailed kangaroo rat): 122095678
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Entry
122095678 CDS
T07891
Symbol
Chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsp03036
]
122095678 (Chd7)
Chromosome and associated proteins [BR:
dsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122095678 (Chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
122095678
NCBI-ProteinID:
XP_042521965
LinkDB
All DBs
Position
Unknown
AA seq
2993 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQTKLTHFDHYNQYEQKMHLMDQPNRMMGSAPGNGLASPHSQYHTPPVPQVPHGGSGGQ
MGVYPGMQNERHGQSFVDSGSMWGPRAVQVPDQIRAPYQQQQPQPPQPAPSGPPAQGHPQ
HMQQMGSYMARGDFSMQQHGQPQQRMSQFSQGQEGLNQGNPFIATSGPGHLSHVPQQSPS
MAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLTFSSRSQTVPSPTI
NNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPSAVGFPSSSGQGLMHQ
QPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIPMDV
GSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSAPRELTGHMRPNGCPGVG
LADPQAIQERLMPGQQHPGQQPSFQQLPTCAPLQAHPGLHHQSSPPHPHHQPWAQLHPSP
QNTPQKVPVHQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSVEQQPQQKKKKKKNN
HIIAEDPSKSFGKDDFPGGVDNQELNRNTLDGSQEEKKKKKRPKAKKDPKEPKEPKEKKE
PKEPKTPKTPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSDASALKKKVNKGKTEGSEN
SDLDKTPPPSPAPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRDSPS
NTSQSEQQESVDAEGPVVEKIMSSRSVKKQKESGEEVEVEEFYVKYKNFSYLHCQWASVE
DLEKDKRIQQKIKRFKSKQGQNKFLSEIEDELFNPDYVEIDRIMDFARSTDDRGEPVTHY
LVKWCSLPYEDSTWELSQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSREYKN
NNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAP
LSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTF
EMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL
FSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKEET
IIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAEEK
ILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILED
YLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIF
DSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMSG
RENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIESEG
KGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQTRL
YSAVKEDELMEFSDLESDSEEKPCVKPRRPQDKSQGYARSECFRVEKNLLVYGWGRWTDI
LSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVNHSG
LSAPVPRGRKGKKVKAQSTQPVVQDADWLTSCNPDTLFQEDSYKKHLKHHCNKVLLRVRM
LYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVFKHGYE
KYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRTPF
KDEIDEFANSPPEDKEEPMEIHAPGKHSESSAELGQLYWPTTSTLTTRLRRLITAYQRSY
KRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFGVI
FDPVKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDDPPDLASMIE
PITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLLVGA
AKHGVSRTDYHILNDPELSFLDAHKNFAQNRGASSLSSLNPLAVGFGQIPPVISSAHSHD
EKVPEQGEGKAEESENSMAKERSEGKEEEEEADAGAKDSKQECEAEASSVKSELKGTDGS
AEPGSKSVSEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETR
DGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQG
LIPGHTPTAVDSSLQRRSFAELSVVGQPSISGGEDITTSPQLSKEDALNLSIPRQRRRRR
RKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTSNFSSLTSK
FILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEGLDL
LFMSHKRTSLSAEDAEVTKAFEEEIETPPIRNIPSPGQLDPDTRIPVVNLEDGTRLVGED
APKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGE
ERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLL
TGPVVRGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQNL
QSLQLAGLMGFPPGLATAATAGGDAKNPAAVLPLMLPGMAGLPNVFGLGGLLNNPLSAAT
GNTTTASSQGEPEDGTSKVEEKGNENEDENKDSEKSTDAVSATDSVNGSVGAATAPAGLP
SNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSTEEKAADKAEG
GPCKDGGNLDSSDAEESLDKTAESSILEDETVQGEELDSLDGGDDIENNEHDE
NT seq
8982 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctttttggcgaggatgggaatatcttcagcgaaggc
cttgaaggtcttggagaatgtggataccccgaaaacccagtaaatcccatgggtcagcag
atgccaatagaccagggctttgcctctttgcagccatcccttcatcatccttccacaaat
caaaatcaaaccaagttgacccattttgatcactataatcagtatgaacagaagatgcat
ctgatggatcagcctaacagaatgatgggcagtgcccctgggaatggactggcatctcca
cactcacagtatcacaccccccctgttccccaggtgccccatggtggcagtggtggtcag
atgggagtctaccccggcatgcagaatgaaaggcacggtcaatcttttgtggacagtggc
tccatgtgggggccccgggctgttcaggtaccagaccagatacgagctccctaccagcaa
cagcagccacagccaccacagccagctccatcggggccaccagcacagggccaccctcag
cacatgcagcagatgggcagctatatggcacgtggggatttttccatgcagcagcatggt
cagccacagcagaggatgagccagttttcccaaggtcaagagggcctcaatcaaggaaat
cctttcattgccacctcaggacctggccacttgtcccacgtgccccaacagagtcccagc
atggccccctccttgcgtcactcggtgcaacagttccatcaccacccccctactgctctc
catggagaatctgttgcccacagtcccagattctccccgaatcctcctcaacaaggggct
gttaggccacaaacacttacctttagctctcggagccagacagtcccctctcctactata
aacaactcagggcagtattctcgatatccttacagtaacctaaatcagggattagttaac
aatacagggatgaatcaaaatttaggccttacaaataataccccaatgaatcagtccgta
ccaagataccccagtgctgtaggattcccatcaagcagtggtcaaggactaatgcaccag
cagcccatccaccccagtggctcacttaaccaaatgaacacacaaactatgcatccttca
cagcctcagggaacttacgcctctccacctcccatgtcacccatgaaagcaatgagtaat
ccagcaggcacgcctcctccacaagtcaggcctggaagtgctgggataccaatggatgtt
ggcagttatccaaatatgccccaccctcagccatctcaccagccccctggtgccatggga
attggacagaggaatatgggccctagaaacatgcagcagtctcgtccatttatgggcatg
tcctcagcaccaagggagttgacagggcacatgagaccaaatggttgtcctggtgttggc
cttgcagatccacaagcaatccaggaacgactgatgcctggccaacaacatcctggccag
cagccgtcttttcagcagttgccaacctgtgctccactgcaggcccacccgggtttgcat
caccagtcttcacctccacacccccatcaccagccttgggcacagctccacccatcaccc
cagaacaccccgcagaaagtgcctgtgcatcagcattctccatcggagccctttctagag
aaaccagtgccggatatgactcaggttagtggaccgaatgctcagctagtgaagagcgat
gattacctgccatcagtagaacagcagccacagcaaaagaagaagaaaaagaaaaacaac
cacattattgcagaggatcccagtaaaagttttggtaaagatgacttccctggtggggtt
gataaccaagaactaaataggaacacattggatgggtctcaagaagaaaaaaagaaaaag
aaaaggccgaaggcaaaaaaagatccgaaggaaccgaaagaacctaaggagaaaaaagag
cccaaggaacccaagacccccaaaacccctaagattcccaaagagccaaaggaaaagaaa
gcaaaaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataagaaacctgat
tcagatgcaagtgctttgaagaaaaaggtcaacaagggaaaaacagaaggttctgaaaat
tcagacttggacaaaacacccccaccatctcctgctcctgaagaagatgaagacccaggt
gttcagaagagacgatccagcaggcaggtgaagagaaagcggtacactgaagacttggag
ttcaagatttctgatgaggaggcagatgatgcagatgctgctggaagagactcaccctct
aatacctcacagtctgagcagcaggaatctgttgatgcagaaggcccagtggtagaaaag
attatgagcagtcggtcagtgaaaaagcagaaggaatctggagaggaggtagaagttgag
gaattttatgtgaaatacaaaaacttctcttatcttcattgtcaatgggcatctgtagaa
gatctggaaaaagataagagaattcagcaaaagattaaacgatttaagtcaaaacagggc
caaaacaagttcctttcagagattgaagatgagctttttaatccagattatgtggagatt
gaccggataatggacttcgcacgtagcacagatgaccggggagagcctgtgactcactat
ctggtgaagtggtgctcacttccttatgaagacagcacatgggagctgagtcaggacata
gatcaagcgaaaatcgaagagtttgagaaactcatgtccagggaaccagaaacagagcgt
gtggagcgacctcctgctgatgattggaagaaatcggagagttccagggagtataaaaac
aataacaaactcagggaataccagttggagggagtaaactggctacttttcaattggtac
aacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaactatccagtccatt
acatttctctatgagatatatttgaaaggaatccatggcccttttttagtgattgcccca
ttgtccacaatccccaactgggaaagggaattccgtacctggacagagttgaatgtggtt
gtgtatcatgggagtcaagctagtcgtcggaccattcagttgtatgaaatgtacttcaaa
gatccccagggtcgagtgataaaggggtcctataagtttcatgccatcatcacgacattt
gagatgattttgactgattgtcctgagctgcggaatattccctggcgctgtgtggttatt
gatgaagcccacagactgaagaatagaaactgcaagctgttggaaggtctcaagatgatg
gacttggaacacaaagtgctgctgacgggaaccccgctacagaacactgtggaggagctc
tttagtttgcttcatttcttggaaccaagtcgcttcccttcagaaaccacctttatgcaa
gaatttggtgatctaaaaacagaagagcaggtgcaaaaacttcaggctattctaaagccg
atgatgttgagacgtctcaaagaggatgtagaaaagaacttggcccccaaagaagaaact
attattgaagttgagctaacaaacattcagaagaaatattaccgagccatccttgagaag
aattttacatttctttccaaaggtggtggacaagctaacgtacctaaccttttaaacact
atgatggaactacgaaaatgctgcaatcatccatacctaatcaatggtgctgaagagaaa
attttggaagagtttaaagaaacacacaatgcagagtctccagattttcagctccaggca
atgatccaggctgctggcaagctagtgctgattgacaagctgttgccaaaactgaaggct
ggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacattctggaagac
tacctcattcagagacggtacccatatgaaaggattgatggccgagtaagagggaacctc
cgccaggcagctattgacagattctccaaacctgattctgataggtttgtcttcctccta
tgtacaagggcaggaggtttaggcattaatcttactgctgctgatacctgcatcatcttt
gattcagactggaacccccaaaatgatctccaggctcaggctagatgtcataggatagga
caaagtaaatctgtgaaaatctacaggctgattacaagaaattcctatgaaagggaaatg
tttgacaaggctagtttgaagcttggtctggataaagctgtgctgcaatctatgagtgga
agagaaaatgctactaatggggtacaacagctttccaagaaagaaatagaggatcttcta
cgaaagggggcttatggtgcactcatggatgaggaggatgaaggatctaagttctgtgaa
gaagatattgaccagattctcctacggaggactcatactattaccattgagtctgaagga
aagggatccacatttgctaaggccagttttgttgcatctggaaataggacagatatttct
ttggatgatccaaatttctggcaaaagtgggcaaagaaggctgaattggacattgatgcc
ttaaatgggaggaacaatctggttattgacactccacgagtaagaaagcagaccaggcta
tacagtgcagtgaaagaggacgagctaatggagttttcagacttggaaagtgattctgag
gaaaagccttgcgtcaagccacggcgtccccaggataagtcacagggctatgcccggagc
gagtgtttccgagtagagaagaatctgctggtctatggctggggtcggtggacagacatc
ctatcacatggacgctacaaacgtcaactcactgagcaagatgtagagactatctgcaga
accattcttgtgtactgtctgaatcattacaaaggagatgagaacatcaaaagcttcatc
tgggatctgatcacacccacggctgatggacaaactcgagccttggtcaatcattctggt
ctgtcagccccagtgccaaggggaaggaaggggaaaaaggtgaaagcccagagtacacag
ccagtggtgcaagatgctgactggctgaccagctgcaacccagataccctgttccaagag
gacagctacaagaagcacctgaagcaccattgcaacaaggtcctgctgcgtgtccgcatg
ctgtactacctaagacaagaagtgataggagaccaagcagataagatcctagagggtgct
gactcaagtgaagcagatgtttggatccctgaacctttccatgctgaagttcctacagat
tggtgggataaggaagcagataaatccctcttaattggagtgttcaaacatggctatgag
aagtacaattccatgagagctgaccctgcactgtgctttctggaacgagttggtatgccc
gatgccaaggccatagctgccgagcaaagaggaacagacatgctagcagatggcggtgat
ggtggagaatttgatagagaagatgaagacccagaatataaaccaaccagaacaccgttc
aaggatgaaatagatgaatttgccaattctcctccagaggataaggaagagcccatggag
attcatgccccaggcaagcacagtgagagtagtgctgagttaggccaactttactggcct
accacttcaaccctgactacgcgtctgcgccggctcattactgcctatcagcgcagctat
aaaaggcaacaaatgaggcaagaggccctaatgaagactgaccggcggagacggcggccc
cgggaggaagtgagagcgctggaggcggaaagggaagctattatatctgagaagcggcaa
aagtggacgagaagagaagaggctgatttttaccgagtggtatccacctttggggttatt
tttgaccctgtgaaacagcaatttgactggaaccagttccgagcctttgccaggcttgac
aaaaagtctgatgagagtttggagaagtacttcagctgctttgtggccatgtgcaggcga
gtctgtcgaatgcctgccaagccagatgatgatccacctgacctcgcctccatgattgag
cctatcacagaggaacgggcctctagaactctgtaccgaattgagctgctgcggaagatc
cgcgagcaggttctgcatcacccacagctaggagagaggctgaagctctgccagcccagc
ctggatcttcctgagtggtgggagtgtggacggcatgaccgggacctgctggtgggtgct
gcgaagcatggggtcagccggacagactaccacatcctcaatgaccccgagctgtccttc
ttggatgcacataagaactttgctcaaaaccgaggggcaagtagtctctcctccttgaac
ccattggctgtaggctttgggcagattcctccagtcatctcatccgctcacagtcacgat
gagaaggtaccagaacaaggtgaaggcaaagcagaggagtctgaaaactcaatggccaaa
gagcggtccgaggggaaagaagaggaagaagaagccgatgctggggccaaggacagcaag
caggaatgtgaggctgaggccagctctgtgaagagtgagctgaaagggacagatggcagt
gcagagccagggtctaaatccgtctcagagaaaggctcagaagaagatgaggaagagaag
ttagaggatgatgataagtccgaggagtcatcccagcctgaagcaggagctgtctctaga
ggaaagaatttcgatgaagaaagcaatgcttctatgagcactgctagggatgaaactcga
gatggattctacatggaggatggagacccctcagtagcacagctccttcacgaaagaaca
tttgccttctcattttggcctaaggatagagtaatgataaaccgattagacaacatctgt
gaagcagtgctgaaaggcaaatggccagtaaataggcgccagatgtttgattttcagggc
ctcatccctggccacacacccactgctgtggacagttctctgcagaggaggagcttcgct
gagctctctgtggttggccagcccagcattagtgggggtgaggacattaccacttctcct
cagctgtcaaaggaagatgccctcaacctctccatccctcgccagcggcggcgaaggagg
agaaaaattgaaatcgaggccgaaagagctgccaagaggcgaaatctcatggagatggtt
gcccagctgcgagagtctcaggtggtctcagaaaatggacaagaaaaagttgtagattta
tcaaaggcctcacgagaggcaacaagttctacctcaaatttttcatctcttacttcaaag
tttatcttgcctaatgtctcgacaccagtatcagatgcctttaagactcaaatggaactg
ctccaagcaggcctttcccgcacacccacaaggcatctgcttaatggctccctggtagat
ggagagcctcccatgaagaggcggcggggcaggaggaaaaacgtggagggccttgatctg
cttttcatgagccacaaacggacatcgttgagtgcagaggatgctgaggtgaccaaagca
tttgaagaagaaatagaaaccccaccaataagaaacattccttctcctggacaactggac
ccagacactcggattcctgttgtaaatcttgaagatggaacaaggctggtgggagaagat
gcacctaaaaacaaggacttggttgaatggctgaagctgcatcctacttacactgttgat
atgccaagttatgtaccaaagaatgcagatgtgctgttttcctcgtttcagaaaccgaaa
cagaaacgacatagatgtcgaaatcctaataaattggatataaacactttgacaggagaa
gaaagagtgcctgttgttaataagcgaaatgggaagaagatgggtggagctatggcacct
cctatgaaggatctacccaggtggctggaagaaaatcctgaatttgcagttgccccagac
tggactgatatagttaagcagtctggatttgttcctgagtcaatgtttgaccgtcttctc
actggacctgtggtgcggggagaaggagcaagcaggagaggaagaaggcccaagagtgaa
attgctcgagcagccgcggcggctgcggcggtggcctccacttcagggatcaaccctctg
ttggtgaacagcctatttgctggaatggacctgacaagccttcagaatctccagaacctc
caatctctccagctggcaggcctcatgggcttccctccaggactggcaacagctgccact
gccggaggcgacgctaagaaccctgctgccgtgctgcccctgatgctgccaggaatggca
ggcctgcccaacgtgtttggactgggcgggctgctgaacaaccccctctcagctgctact
ggaaacaccactactgcttctagtcaaggagaaccagaagacggcacttcaaaagtggaa
gagaaaggaaacgagaatgaggacgagaacaaagactctgagaaaagcacagatgctgtt
tcagctactgactctgtgaatggatctgttggtgctgctactgccccggctggattgccc
tccaacccactagccttcaaccctttcctcctgtccaccatggccccaggcctcttctac
ccatccatgtttctacctccaggacttgggggattgacgctgcctgggttcccagcattg
gccggactccagaatgccgtgggctccactgaagaaaaggctgctgacaaggccgagggt
ggcccctgtaaagatggagggaacctcgacagcagtgatgccgaggagagcctggacaag
actgcagagtcctccatcttagaagatgagaccgtgcagggcgaagagctagactcactg
gatgggggggatgacatagaaaacaatgaacatgatgaataa
DBGET
integrated database retrieval system
