Dipodomys spectabilis (banner-tailed kangaroo rat): 122095685
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Entry
122095685 CDS
T07891
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dsp04121
]
122095685
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122095685
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122095685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_3
zf-RING_11
zf-RING_Vps41
OVT1
WEMBL
zf_RING_Vps8
zf-RING-like
Zn_ribbon_8
zf-RING_16
DUF745
Fez1
RINGv
RING_XB3-XBAT31
ACR_tran
FANCL_C
zf_RING_Vps8_fungal
DUF3450
HIP1_clath_bdg
VPS11_C
Motif
Other DBs
NCBI-GeneID:
122095685
NCBI-ProteinID:
XP_042521972
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIIN
KLFFDFAQEEENALDAEFLKNELDNTRAQLSQKEKEKRNSQVIIDTLRDTLEERNAMVES
LQKALDKSEMLCSTLRKQMKYLEQQQDETKQAREEALQLKNKMKSMEQIELLLQSQRPEV
EEMIRYMGVGQSAVEQLSTYCVSLKKEYENLKEARKASGELADKLKKELTSSKNKLQVVY
SELDQAKLELRSTQKDLQNADKEIMSLKKKLTMLQETLKLPPGAKETVNRLVLESPAPQI
QKLKLRRPSYSDDIDLDATFDVETPPAQPSSSLHDHHPKQLSLEKAHSPMQDVFEKMPKR
SKQESQFSLGGQLCAGEPDEELAAVFPRFIRNAVLRHKQPKKTVSESCRSTDVIRTGFDG
LGGRTKFIQPTDTGMIRPLPVKPKANHKERIKMKTKHSPTQAKLDAFLWQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgccctgtgcacgatttgctccgacttcttcgaccattcccgcgatgtg
gcagccatccactgcggccacacttttcacctgcagtgcctcattcagtggttcgagaca
gcaccaagtcgaacctgcccacaatgccgaatccaggttggcaaaaggactattatcaac
aaactcttctttgactttgctcaggaggaggagaatgccttggatgcagaattcttgaag
aatgaactggacaataccagagcccaactttctcagaaagagaaagagaaacggaacagt
caggttatcattgacactctgcgagacacactggaggagcgcaacgccatggtggaatct
ctgcagaaggccttagacaagtctgagatgctgtgctccactctcagaaagcagatgaaa
tacttggagcagcagcaagatgagactaaacaagcacgagaggaggcccttcaactcaag
aacaagatgaagtccatggagcagattgagctcctgctccaaagccagaggcctgaggtg
gaggagatgatccgatacatgggtgtggggcagtcagcagtggagcagctgtctacgtac
tgtgtgtccctcaagaaagagtatgagaatctgaaagaagcacggaaagcctcaggggag
ctggctgacaagctgaagaaggaattgacctcctccaaaaacaagttacaggtagtctac
tctgagttggatcaggccaagttagaactgaggtcaacccagaaggacttacagaatgct
gacaaggaaatcatgagtctaaaaaagaagctaacgatgttacaagaaaccttgaaactg
ccaccaggagccaaggagactgtcaaccgcctagttttagagagcccagctccacagata
cagaaactgaagctccgacggccatcctacagtgacgatattgacctcgacgctaccttt
gatgtagaaacccctccagcccaaccctccagctccctgcatgatcatcaccccaagcag
ctctccctggagaaggcacactctcccatgcaggatgtcttcgagaagatgcccaaaaga
tctaagcaggaatcccaattctcactgggtggccagctgtgtgcaggagagccagatgag
gagctagctgctgtgttcccccgcttcatccggaatgctgtcctgcgtcacaaacaaccc
aagaagactgtgtcagagtcctgtcgcagcacagatgtgataagaacaggattcgatgga
cttggaggccgaacaaaattcatacagcctacagacacaggcatgatccgcccactacca
gttaaacccaaggccaaccataaggagagaataaagatgaagacaaaacattctcccact
caggccaagttagatgccttcctgtggcagtga
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integrated database retrieval system
