Dipodomys spectabilis (banner-tailed kangaroo rat): 122096115
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Entry
122096115 CDS
T07891
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03022
Basal transcription factors
dsp03420
Nucleotide excision repair
dsp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122096115
09124 Replication and repair
03420 Nucleotide excision repair
122096115
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
122096115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsp03021
]
122096115
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122096115
Transcription machinery [BR:
dsp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122096115
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122096115
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
PH_SLA1
Motif
Other DBs
NCBI-GeneID:
122096115
NCBI-ProteinID:
XP_042522466
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MATSTEYLLVVKKVRQKKKDGVLYLMEERIAWAPEGKDSFTISHRYADINCQKISPEGKA
KIQLQLVLHSGDTIDFHFSNESTAVKERDAVKELLQHLLPKFKRKATKKLEGKTRMLQED
PALFQLYKDLVVSQVISAEEFWANHLGVDATDSSSTSHHKQDVGVSAAFLADVQPQTDDC
NRLRFNLTSDNIESIFKTYPAVKKKYVENVPHHISEKEFWARFFQSHYFHRDQLIAGSKG
LFAECANIDEEELKTAISLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSTSIMETNNA
AIIKRFNHHSAMVLAAGLRKPQAQNEENAESSCTDGNSGDAECFQPAVTRPKLQESIEYE
DLEKSNSIQTIALNLKKSDGYYPGPIPNQSLQYATSQEIIDSFQSIRQEMEAYTPRLTQA
LSSSAAISAITALSPGGALMQGGTQQAINCMLPDDIQSELKHLYAAVGELLQHFWSCFPV
NTPALEAKVMKMKSNLERFQVIKLNPFKEKIERQLLSPNLVSHIEEMLQTAYNKLHSWQS
QRRMKKT
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttccactgaatatttgttggttgtaaaaaaggtgcgtcaaaagaagaaggat
ggagtgttatacctcatggaggaaagaattgcttgggcacctgaaggcaaagatagtttt
accatcagtcataggtatgcagatattaactgtcagaagatcagtccagaaggcaaagct
aaaattcaacttcaactggttctgcattcaggagacaccattgacttccatttttccaat
gaaagcacagcagtgaaagagcgagatgcagtgaaggaacttcttcagcatctactgccc
aaattcaagaggaaagcaactaagaaactggaaggaaaaaccagaatgctccaagaagac
cctgctttgtttcagctgtacaaagaccttgttgtaagtcaagtgatcagtgctgaggaa
ttctgggccaatcatttgggtgtagatgcaacagatagttcttccacatcccatcacaag
caggatgttggcgtttctgcagcatttctggctgatgtccagccccaaacagatgactgt
aataggttaagatttaatttaacatctgataacattgaatccatatttaagacctaccca
gcagtaaagaagaaatatgtagaaaatgttccccaccacatatcagaaaaggaattttgg
gcacgttttttccagtctcattattttcatagggaccagctaattgcaggttcaaagggt
ctctttgcagaatgtgccaacatagatgaagaggagttaaaaacagcgatttcattagga
gtgaaaaacccactactagatttgacagctttggaagacaagccactagatgagggctat
gggatttcctcagtgccatctacttccaattctacatccataatggagacgaataatgct
gcaatcataaagagatttaaccatcacagtgccatggttctggcagctggtctcaggaaa
ccacaagcacaaaatgaagaaaatgctgaatccagctgcacggatggaaattctggagat
gctgaatgctttcagccagcagtcaccaggccaaagttgcaagagtccattgaatatgaa
gacttggaaaaaagcaattccattcaaacaattgcactaaacctcaagaagtctgatggg
tattatcctggtccaattccaaaccagtcactacagtatgcaacaagtcaggaaattatt
gattcttttcaaagtattcgacaagaaatggaagcttatacacccagattgactcaggcc
ctctcaagtagtgctgctatcagtgccatcacagcactgtcacctggaggagcacttatg
cagggagggacacagcaagccataaactgtatgttgccagatgatattcagtctgaattg
aaacatttgtatgcggctgttggagaacttctccagcatttctggtcctgctttcctgtc
aatacaccagccctcgaagcaaaggtaatgaaaatgaaaagtaatttggaacggttccaa
gttataaagctcaacccatttaaagagaaaattgagagacagcttttaagccccaatttg
gtaagtcacatagaagaaatgctccagacagcctacaacaagcttcactcatggcagtcg
cagcgccggatgaagaagacctga
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