Dipodomys spectabilis (banner-tailed kangaroo rat): 122096141
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Entry
122096141 CDS
T07891
Symbol
Trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
122096141 (Trim71)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsp03019
]
122096141 (Trim71)
04121 Ubiquitin system [BR:
dsp04121
]
122096141 (Trim71)
Enzymes [BR:
dsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122096141 (Trim71)
Messenger RNA biogenesis [BR:
dsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122096141 (Trim71)
Ubiquitin system [BR:
dsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122096141 (Trim71)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
zf-B_box
DUF5128
ANCHR-like_BBOX
SGL
zf-C3HC4
zf-RING_5
zf-B_box_Trim66
CRLF3_N
Motif
Other DBs
NCBI-GeneID:
122096141
NCBI-ProteinID:
XP_042522493
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MASFPETDFQICLLCKEMCGSPAPLSSNSSASSSSSQTSTSSGGGGGGPGVAARRLHVLP
CLHAFCRPCLEAHRLPAAGGSAPGEPLKLRCPVCDQKVVLAEAAGMDALPSSAFLLSNLL
DAVVATADEPPPKNGRAGAPAVAGGHSNHRHHAHHAHTRAAASAPPLPPAPPPPPPAPSR
SAPGGPAASPSALMLRRPHGCSSCDEGNAASSRCLDCQEHLCDNCVRAHQRVRLTKDHYI
ERGPPGPAAAAAAAAAAAAQQLGLGPPFSSSPFSILSVFPERLGFCQQHDDEVLHLYCDT
CSVPICRECTMGRHGGHSFVYLQDALQDSRALTIQLLADAQQGRQAIQLSIEQAQTVAEQ
VEMKVKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLE
STISAVQQVLEEGRALDVLLARDRMLAQVQELKTLRSLLQPQEDDRVMFTPPDQTLYLAI
KSFGFVSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGPD
GNLFGAEVSDQQNGTYLVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGLP
GLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGSFHHKFGTLGSRPGQ
FDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSEG
KILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRLL
VIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFEANGSFLCKFG
AQGSGFGQMDRPSGIAVTPDGMIVVVDFGNNRILIF
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgttccccgagaccgatttccagatctgcctgctgtgcaaggagatgtgcggc
tcgccggcgccgctctcctccaattcctccgcgtcttcctcgtcttcgcagacgtccacg
tcgtccgggggcggcggcggaggcccgggggtggcggcgcgccgcctgcacgtcctgccc
tgcctgcacgccttctgccgcccctgcctcgaggcgcaccggctgccggcagccggcggc
agcgccccgggagaaccgctgaaactgcgctgccccgtgtgcgaccagaaagtcgtcctc
gccgaggcggcgggcatggacgcgctgccttcgtccgccttcctgctcagcaacctgctg
gacgccgtggtggccacggccgacgagccgccgcccaagaacgggcgcgccggcgcccca
gcggtagcgggtggccacagcaaccaccggcaccacgcgcaccacgcgcacacgcgcgcg
gccgcctccgcgccgcctctcccgcccgcgccgccgccgcctccgcccgcgccttcccgc
tcggctcccggcggcccagctgcctccccgtccgctctgatgttgcgccggccccacggc
tgcagctcttgcgacgagggcaacgcggcttcgtcgcgctgcctcgactgtcaggaacac
ctgtgcgacaactgcgtccgcgcgcaccagcgcgtgcgcctcaccaaggaccactacatc
gagcgcggcccgccggggcccgcggccgccgccgccgctgccgccgccgccgcggcgcag
cagctcgggctcgggccgcccttctccagctcgcccttctccatcctctccgtgtttccc
gagcgcctcggcttttgccagcagcacgacgacgaggtgctgcatctgtactgtgacact
tgttctgtgcccatctgccgtgagtgtacaatgggccgccatgggggccacagttttgtt
tatctgcaggatgcactacaggactcaagggctctcaccatccagctgctggctgacgca
cagcaaggccgccaagccatccagctgagcatcgagcaggcccagactgtggcagaacag
gtggagatgaaggtgaaagtggtacagtcagaagtcaaagctgtgactgccaggcacaag
aaggccctggaggagcgggagtgcgagctgctgtggaaggtagagaagatccgccaggtg
aaggccaagtctctgtacctgcaggtggagaagctgcggcaaaacctcaacaagctggaa
agtaccatcagtgccgtccagcaggtcctggaggaaggtcgggcactggatgtcctgctg
gctcgagaccggatgctagcccaggtgcaggagctgaagaccctgcggagcctcctgcag
ccccaggaagatgaccgggtcatgttcacaccccctgaccagacactgtaccttgccatc
aagtcctttggctttgttagcagtggggcctttgccccacttactaaggctactggtgat
ggcctcaagcgggccctccagggtaaggtggcctccttcactgtcattggttatgaccat
gatggtgagccacgcctctcaggaggtgatctaatgtcagctgtggtcttgggtcctgat
ggcaatctgtttggagcagaggtgagtgatcagcagaacgggacttacttggtgagctac
cggccccagctagaaggtgagcacctggtgtctgtgaccctgtgcaaccaacatattgag
aacagcccctttaaggtagtggtcaagtctggccgcagctatgtgggcatcgggctgccg
ggcctgagctttggcagtgagggtgacagtgatggcaagctctgccgcccttggggagtg
agtgtggataaggaaggctatatcatcgtggccgaccgcagcaataatcgcatccaggtg
ttcaagccttgtggctccttccaccacaaatttggcaccctgggctcccggcctgggcag
ttcgaccgaccagctggggtggcctgtgatgcttcacgcaggatcgtggtggctgacaag
gacaatcatcgcatccagatcttcacctttgagggtcagttcctcctcaagtttggtgag
aaaggaaccaaaaacgggcagttcaactacccttgggatgtggcagtcaattctgaggga
aagatcctcgtgtcagatacgcggaatcaccgcatccagctcttcgggcccgatggggtt
ttcttgaataagtatggcttcgagggggctctctggaagcactttgactccccacggggt
gtggccttcaaccatgaaggtcacctggtggtcaccgacttcaacaaccaccgcctcctg
gtcattcaccctgactgccaatccgcacgttttctgggctcggagggcactggcaatggg
cagttcttgcgcccacaaggtgtggccgtggaccaggaggggcgtatcattgtggctgat
tccagaaaccaccgtgtgcagatgtttgaagccaacggtagcttcttgtgcaagtttggt
gctcaaggcagcggctttgggcagatggatcgcccgtctggcatcgcagtcactcccgat
ggcatgattgtcgtggtagactttggcaacaatcgaatcctcattttctaa
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integrated database retrieval system
