Dipodomys spectabilis (banner-tailed kangaroo rat): 122096224
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Entry
122096224 CDS
T07891
Symbol
Slx1a
Name
(RefSeq) structure-specific endonuclease subunit SLX1 isoform X1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
dsp
Dipodomys spectabilis (banner-tailed kangaroo rat)
Pathway
dsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122096224 (Slx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsp03400
]
122096224 (Slx1a)
DNA repair and recombination proteins [BR:
dsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122096224 (Slx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
Motif
Other DBs
NCBI-GeneID:
122096224
NCBI-ProteinID:
XP_042522610
LinkDB
All DBs
Position
Unknown
AA seq
271 aa
AA seq
DB search
MGPGGGAVKPGRFFGVYLLYCLNPRHRGRVYVGFTVNPARRVQQHNGGRKKGGAWRTSGR
GPWEMVLIVHGFPSAVAALRFEWAWQHPQASRRLAHVGPRMRSEVAFDFHLRVLAHMLRA
PPWARLPLTLRWLRQDFRRDLCPLPPPHVPLAFGPPPPKASAPMPRAVPVADKPAQGSET
GCTLCACAFQDEEGPLCCPHPDCSLRAHVICLAEEFLREEPEQLLPLEGQCPCCKNSLLW
GDLISLCGMSTEEEEEDSELEQEHWTDMLET
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccggagggggtgcagtgaagccagggcgcttcttcggggtctacctgctctac
tgcctgaaccctcggcatcgaggccgagtctacgtcgggttcacggttaatcctgctcgt
cgagtccagcagcacaacggcggtcgcaaaaagggcggggcctggcggactagcggaaga
gggccgtgggagatggtgctcattgtgcatggcttcccgtctgctgtagcagctcttcgg
ttcgagtgggcctggcagcacccgcaagcctcgcgccgcctagcacacgtgggtccgcgc
atgcgcagtgaagtagccttcgatttccacctgcgcgtgctggcgcatatgctgcgtgcg
ccgccctgggcgcgtctcccgctcacactgcgctggctacgccaggacttccgccgagat
ctttgtcctctgccgccgccgcacgtgccactggcctttgggccaccgccgcctaaggcc
tcggcccccatgcccagggctgtgcctgtagctgacaagcctgcccaaggctctgagacc
ggctgcaccctctgcgcatgcgcgttccaggatgaagaggggcccctgtgctgcccccac
cctgactgctccctcagggcccatgtaatctgcttggcagaggagttccttagggaagaa
ccagagcagcttttgcccctagaaggccagtgtccttgttgtaagaactcactgctctgg
ggagacctgatctcactgtgtggaatgagcactgaggaggaagaggaggactcagaatta
gaacaggaacactggacagacatgttggaaacctga
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